RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TSPYL2Q9H2G4 693 aaPredicted RBP24.34■■□□□ 1.49
PDLIM1-202ENST00000477757 FGBP02675 491 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 SLFNL1Q499Z3 407 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 ARMCX2Q7L311 632 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 PRPF38AQ8NAV1 312 aaKnown RBP24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 SLC43A3Q8NBI5 491 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 NECAB3Q96P71 396 aaPredicted RBP24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 KATNBL1Q9H079 304 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 HIPK3Q9H422 1215 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
PDLIM1-202ENST00000477757 BMP1P13497 986 aa24.32■■□□□ 1.48
PDLIM1-202ENST00000477757 CLASRPQ8N2M8 674 aaKnown RBP24.32■■□□□ 1.48
PDLIM1-202ENST00000477757 UMODL1Q5DID0 1318 aa24.32■■□□□ 1.48
PDLIM1-202ENST00000477757 NDUFB10O96000 172 aa24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 HOXD11P31277 338 aaPredicted RBP24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 CTR9Q6PD62 1173 aa24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 OTOP2Q7RTS6 562 aa24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 CPXCR1Q8N123 301 aa24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 FBXO40Q9UH90 709 aa24.31■■□□□ 1.48
PDLIM1-202ENST00000477757 LRRC37A2A6NM11 1700 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 AAK1Q2M2I8 961 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 PPP2R2DQ66LE6 453 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 ANKRD35Q8N283 1001 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 SLC38A10Q9HBR0 1119 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 NYAP2Q9P242 653 aa24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 ARPP21Q9UBL0 812 aaPredicted RBP24.3■■□□□ 1.48
PDLIM1-202ENST00000477757 F5H6K3 240 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 ZBED4O75132 1171 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 CABYRO75952 493 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 IFIT2P09913 472 aaKnown RBP24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 BEX3Q00994 111 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 KLRC3Q07444 240 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 CXCL17Q6UXB2 119 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 CCDC144CPQ8IYA2 1237 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 CHST13Q8NET6 341 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 KIF1BPQ96EK5 621 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 NOC4LQ9BVI4 516 aaKnown RBP24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 PCDHA11Q9Y5I1 949 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 SLC4A4Q9Y6R1 1079 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 MYH7P12883 1935 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 ASTN1O14525 1302 aa24.29■■□□□ 1.48
PDLIM1-202ENST00000477757 RASA1P20936 1047 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 SLC4A3P48751 1232 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 RABGGTBP53611 331 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 OAZ1P54368 228 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 TFF2Q03403 129 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 UBE3CQ15386 1083 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 MICALL1Q8N3F8 863 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 WNT8AQ9H1J5 351 aa24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 RAVER2Q9HCJ3 691 aaKnown RBP24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 CTDP1Q9Y5B0 961 aaPredicted RBP24.28■■□□□ 1.48
PDLIM1-202ENST00000477757 CHGBP05060 677 aa24.27■■□□□ 1.48
PDLIM1-202ENST00000477757 TLK2Q86UE8 772 aa24.27■■□□□ 1.48
PDLIM1-202ENST00000477757 SEZ6LQ9BYH1 1024 aa24.27■■□□□ 1.48
PDLIM1-202ENST00000477757 SLC4A7Q9Y6M7 1214 aa24.27■■□□□ 1.48
PDLIM1-202ENST00000477757 TCF20Q9UGU0 1960 aaKnown RBP24.27■■□□□ 1.48
PDLIM1-202ENST00000477757 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 ERC2O15083 957 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 KCNQ1P51787 676 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 CCL23P55773 120 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 TNFAIP2Q03169 654 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 ITGA7Q13683 1181 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 KIFC2Q96AC6 838 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 GNEQ9Y223 722 aaKnown RBP24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 ARIH1Q9Y4X5 557 aaPredicted RBP24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 GRIN2DO15399 1336 aa24.26■■□□□ 1.47
PDLIM1-202ENST00000477757 MYOGP15173 224 aa24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 FSCN1Q16658 493 aaKnown RBP24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 FAM133AQ8N9E0 248 aa24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 HAUS7Q99871 368 aa24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 BOLA2Q9H3K6 86 aa24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 FEM1BQ9UK73 627 aa24.25■■□□□ 1.47
PDLIM1-202ENST00000477757 MYH4Q9Y623 1939 aa24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 ATP5JP18859 108 aa24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 CNTN2Q02246 1040 aa24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 NOL8Q76FK4 1167 aaKnown RBP24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 RPUSD2Q8IZ73 545 aaKnown RBP24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 VWCEQ96DN2 955 aa24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 TRPV6Q9H1D0 765 aa24.24■■□□□ 1.47
PDLIM1-202ENST00000477757 IGKV6D-41A0A0C4DH26 115 aa24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 B4GALT4O60513 344 aa24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 ATP2A2P16615 1042 aaKnown RBP24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 POU3F3P20264 500 aaPredicted RBP24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 SBK1Q52WX2 424 aa24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 HOMER2Q9NSB8 354 aa24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 SYNPO2Q9UMS6 1093 aa24.23■■□□□ 1.47
PDLIM1-202ENST00000477757 ZBBXA8MT70 800 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 SKIV2LQ15477 1246 aaKnown RBP24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 PUS7LQ9H0K6 701 aaKnown RBP24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 ACAD9Q9H845 621 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 MKNK2Q9HBH9 465 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 CLIP2Q9UDT6 1046 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 HCN4Q9Y3Q4 1203 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 MTCH2Q9Y6C9 303 aa24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 PRRC2BQ5JSZ5 2229 aaKnown RBP24.22■■□□□ 1.47
PDLIM1-202ENST00000477757 ZEB2O60315 1214 aa24.21■■□□□ 1.47
PDLIM1-202ENST00000477757 PFKMP08237 780 aa24.21■■□□□ 1.47
PDLIM1-202ENST00000477757 GMCL1P1Q8NEA9 526 aa24.21■■□□□ 1.47
PDLIM1-202ENST00000477757 AGBL1Q96MI9 1066 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms