RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
TRAIP-206ENST00000477546 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
TRAIP-206ENST00000477546 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
TRAIP-206ENST00000477546 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
TRAIP-206ENST00000477546 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 FLOT1O75955 427 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 CXCL17Q6UXB2 119 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 PI16Q6UXB8 463 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 SPATA5Q8NB90 893 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 ATOH1Q92858 354 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-206ENST00000477546 EHD4Q9H223 541 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
TRAIP-206ENST00000477546 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
TRAIP-206ENST00000477546 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 LCHNA4D1U4 455 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 TMEM221A6NGB7 291 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 M0R296 226 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 COPB2P35606 906 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 TIMM10P62072 90 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 ASCL5Q7RTU5 278 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 XAGE2Q96GT9 111 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
TRAIP-206ENST00000477546 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
TRAIP-206ENST00000477546 LRP2BPQ9P2M1 347 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 EPG5Q9HCE0 2579 aa12.63□□□□□ -0.39
TRAIP-206ENST00000477546 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
TRAIP-206ENST00000477546 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 BAIAP3O94812 1187 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 RFC2P35250 354 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 ERVK-21P61565 698 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 MTX1Q13505 466 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-206ENST00000477546 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-206ENST00000477546 FBXL6Q8N531 539 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 TGS1Q96RS0 853 aaKnown RBP12.62□□□□□ -0.39
TRAIP-206ENST00000477546 ABHD16BQ9H3Z7 469 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
TRAIP-206ENST00000477546 MS4A1P11836 297 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 BEX3Q00994 111 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 SEPT2Q15019 361 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
TRAIP-206ENST00000477546 C1orf115Q9H7X2 142 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 COPRSQ9NQ92 184 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-206ENST00000477546 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 ADAMTS5Q9UNA0 930 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
TRAIP-206ENST00000477546 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
TRAIP-206ENST00000477546 DNAJC25-GNG10A0A024R161 153 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 PRR23AA6NEV1 266 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 SHMT1P34896 483 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 STAT3P40763 770 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 COL19A1Q14993 1142 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 MRPL38Q96DV4 380 aaKnown RBP12.6□□□□□ -0.39
TRAIP-206ENST00000477546 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-206ENST00000477546 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 TRIOO75962 3097 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 TNKSO95271 1327 aa12.6□□□□□ -0.39
TRAIP-206ENST00000477546 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
TRAIP-206ENST00000477546 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-206ENST00000477546 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
TRAIP-206ENST00000477546 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-206ENST00000477546 KCNJ6P48051 423 aa12.59□□□□□ -0.39
TRAIP-206ENST00000477546 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
TRAIP-206ENST00000477546 TIGD5Q53EQ6 642 aa12.59□□□□□ -0.39
TRAIP-206ENST00000477546 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
TRAIP-206ENST00000477546 ZNF214Q9UL59 606 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-206ENST00000477546 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
TRAIP-206ENST00000477546 ZEB2O60315 1214 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 CYP2C9P11712 490 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
TRAIP-206ENST00000477546 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 FTOQ9C0B1 505 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAIP-206ENST00000477546 ASTN1O14525 1302 aa12.58□□□□□ -0.4
TRAIP-206ENST00000477546 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 KMT2EQ8IZD2 1858 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 CDK5RAP2Q96SN8 1893 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 LINC01553A4QN01 128 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 H0Y858 1186 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 VWA5AO00534 786 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 IQCF3P0C7M6 154 aa12.57□□□□□ -0.4
TRAIP-206ENST00000477546 MCAMP43121 646 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms