RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ARL4AP40617 200 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 PMS1P54277 932 aaKnown RBP6.99□□□□□ -1.29
UBR3-209ENST00000477461 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 CWF19L1Q69YN2 538 aaKnown RBP6.99□□□□□ -1.29
UBR3-209ENST00000477461 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 SLCO6A1Q86UG4 719 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 NAT16Q8N8M0 369 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 RNF34Q969K3 372 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 ZCCHC4Q9H5U6 513 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 KLHL14Q9P2G3 628 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 IMPACTQ9P2X3 320 aa6.99□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQC6 194 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQD8 194 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 GSNP06396 782 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 HOXA5P20719 270 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
UBR3-209ENST00000477461 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 ZNF445P59923 1031 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 TCERG1LQ5VWI1 586 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 SLC12A9Q9BXP2 914 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 ZNF451Q9Y4E5 1061 aa6.98□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
UBR3-209ENST00000477461 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 RFXAPO00287 272 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 IMPDH2P12268 514 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 CDR1P51861 262 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 ERVFRD-1P60508 538 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 YBX1P67809 324 aaKnown RBP6.97□□□□□ -1.29
UBR3-209ENST00000477461 TMC6Q7Z403 805 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 TM9SF2Q99805 663 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
UBR3-209ENST00000477461 N4BP3O15049 544 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 MSL3P1P0C860 447 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 CTSWP56202 376 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 FIBCD1Q8N539 461 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 NOL6Q9H6R4 1146 aaKnown RBP6.96□□□□□ -1.3
UBR3-209ENST00000477461 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
UBR3-209ENST00000477461 ACSL6Q9UKU0 697 aa6.96□□□□□ -1.3
UBR3-209ENST00000477461 CD247P20963 164 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 GUCY2CP25092 1073 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 MVKQ03426 396 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
UBR3-209ENST00000477461 PAK2Q13177 524 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 PPP2R5DQ14738 602 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 C9orf131Q5VYM1 1079 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 LDHDQ86WU2 507 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 MZB1Q8WU39 189 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
UBR3-209ENST00000477461 METTL5Q9NRN9 209 aaKnown RBP6.95□□□□□ -1.3
UBR3-209ENST00000477461 PCDHB10Q9UN67 800 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 LTBP3Q9NS15 1303 aa6.95□□□□□ -1.3
UBR3-209ENST00000477461 A0A1W2PQJ5 194 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 B8ZZF3 427 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 TRIM13O60858 407 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 ENDOUP21128 410 aaKnown RBP6.94□□□□□ -1.3
UBR3-209ENST00000477461 AFF3P51826 1226 aaKnown RBP6.94□□□□□ -1.3
UBR3-209ENST00000477461 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
UBR3-209ENST00000477461 ADCY4Q8NFM4 1077 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 FCRL3Q96P31 734 aaPredicted RBP6.94□□□□□ -1.3
UBR3-209ENST00000477461 PRR13Q9NZ81 148 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 HCFC2Q9Y5Z7 792 aa6.94□□□□□ -1.3
UBR3-209ENST00000477461 HRKO00198 91 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 ABLIM1O14639 778 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 CD3EP07766 207 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 IFNGR1P15260 489 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 TACR1P25103 407 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 NOP2P46087 812 aaKnown RBP6.93□□□□□ -1.3
UBR3-209ENST00000477461 GNPTABQ3T906 1256 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 OLFML2BQ68BL8 750 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 RPTNQ6XPR3 784 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 IGDCC3Q8IVU1 814 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
UBR3-209ENST00000477461 DACT3Q96B18 629 aaPredicted RBP6.93□□□□□ -1.3
UBR3-209ENST00000477461 TNFRSF12AQ9NP84 129 aa6.93□□□□□ -1.3
UBR3-209ENST00000477461 PRRG2O14669 202 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 ITGA4P13612 1032 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 TCEAL1Q15170 157 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 CNKSR3Q6P9H4 555 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 TMEM151BQ8IW70 566 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 ZNF654Q8IZM8 581 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 TAB3Q8N5C8 712 aaPredicted RBP6.92□□□□□ -1.3
UBR3-209ENST00000477461 RBBP8NLQ8NC74 664 aaPredicted RBP6.92□□□□□ -1.3
UBR3-209ENST00000477461 SMARCC1Q92922 1105 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms