RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 GBF1Q92538 1859 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 APBB1O00213 710 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 BMP1P13497 986 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 NKX3-2P78367 333 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
BRCA1-213ENST00000476777 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
BRCA1-213ENST00000476777 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-213ENST00000476777 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
BRCA1-213ENST00000476777 SLC28A3Q9HAS3 691 aa13.68□□□□□ -0.22
BRCA1-213ENST00000476777 ATP2A1O14983 1001 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 TLR3O15455 904 aaKnown RBP13.67□□□□□ -0.22
BRCA1-213ENST00000476777 FGBP02675 491 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 ADD2P35612 726 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 AMOTL1Q8IY63 956 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 SLC43A3Q8NBI5 491 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 KATNBL1Q9H079 304 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 MTIF3Q9H2K0 278 aaKnown RBP13.67□□□□□ -0.22
BRCA1-213ENST00000476777 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
BRCA1-213ENST00000476777 UMODL1Q5DID0 1318 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 ZBED9Q6R2W3 1325 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 CHGBP05060 677 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 OTOP2Q7RTS6 562 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 PRPF38AQ8NAV1 312 aaKnown RBP13.66□□□□□ -0.22
BRCA1-213ENST00000476777 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-213ENST00000476777 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
BRCA1-213ENST00000476777 GREB1LQ9C091 1923 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-213ENST00000476777 F5H6K3 240 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 NDUFB10O96000 172 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 MYOGP15173 224 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 RABGGTBP53611 331 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 BEX3Q00994 111 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 TFF2Q03403 129 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 KLRC3Q07444 240 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 CXCL17Q6UXB2 119 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 ANKRD35Q8N283 1001 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
BRCA1-213ENST00000476777 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
BRCA1-213ENST00000476777 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
BRCA1-213ENST00000476777 ASTN1O14525 1302 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 ZBED4O75132 1171 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 IFIT2P09913 472 aaKnown RBP13.64□□□□□ -0.23
BRCA1-213ENST00000476777 CCL23P55773 120 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 MICALL1Q8N3F8 863 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 CHST13Q8NET6 341 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 VWCEQ96DN2 955 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 DDRGK1Q96HY6 314 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
BRCA1-213ENST00000476777 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 SLC38A10Q9HBR0 1119 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
BRCA1-213ENST00000476777 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
BRCA1-213ENST00000476777 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
BRCA1-213ENST00000476777 CABYRO75952 493 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 RASA1P20936 1047 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 KCNQ1P51787 676 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 CNTN2Q02246 1040 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 ITGA7Q13683 1181 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 AAK1Q2M2I8 961 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.23
BRCA1-213ENST00000476777 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 BOLA2Q9H3K6 86 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 FBXO40Q9UH90 709 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 PCDHA11Q9Y5I1 949 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
BRCA1-213ENST00000476777 ERC2O15083 957 aa13.62□□□□□ -0.23
BRCA1-213ENST00000476777 OAZ1P54368 228 aa13.62□□□□□ -0.23
BRCA1-213ENST00000476777 FSCN1Q16658 493 aaKnown RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 NOL8Q76FK4 1167 aaKnown RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 RPUSD2Q8IZ73 545 aaKnown RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
BRCA1-213ENST00000476777 PUS7LQ9H0K6 701 aaKnown RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 ARPP21Q9UBL0 812 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-213ENST00000476777 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 B4GALT4O60513 344 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 ATP2A2P16615 1042 aaKnown RBP13.61□□□□□ -0.23
BRCA1-213ENST00000476777 ATP5JP18859 108 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-213ENST00000476777 PTGS1P23219 599 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 HAUS7Q99871 368 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 SEZ6LQ9BYH1 1024 aa13.61□□□□□ -0.23
BRCA1-213ENST00000476777 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms