RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
HDAC6-219ENST00000476625 CEP95Q96GE4 821 aa14.35□□□□□ -0.11
HDAC6-219ENST00000476625 TOX2Q96NM4 488 aa14.35□□□□□ -0.11
HDAC6-219ENST00000476625 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
HDAC6-219ENST00000476625 NKX2-4Q9H2Z4 354 aa14.35□□□□□ -0.11
HDAC6-219ENST00000476625 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-219ENST00000476625 YBX2Q9Y2T7 364 aaKnown RBP14.35□□□□□ -0.11
HDAC6-219ENST00000476625 TMEM265A0A087WTH1 108 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
HDAC6-219ENST00000476625 MYOGP15173 224 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 RABGGTBP53611 331 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-219ENST00000476625 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 GLT1D1Q96MS3 346 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 SEC62Q99442 399 aaKnown RBP14.34□□□□□ -0.11
HDAC6-219ENST00000476625 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
HDAC6-219ENST00000476625 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 PTPRSQ13332 1948 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 REV3LO60673 3130 aa14.34□□□□□ -0.11
HDAC6-219ENST00000476625 SOWAHBA6NEL2 793 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 ARVCFO00192 962 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 RAB11FIP3O75154 756 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-219ENST00000476625 CCL23P55773 120 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 GJA9P57773 515 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 PSMC6P62333 389 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 GNASQ5JWF2 1037 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 PRPF38AQ8NAV1 312 aaKnown RBP14.33□□□□□ -0.12
HDAC6-219ENST00000476625 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 AGBL1Q96MI9 1066 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-219ENST00000476625 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 PDGFCQ9NRA1 345 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
HDAC6-219ENST00000476625 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
HDAC6-219ENST00000476625 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-219ENST00000476625 ZBED4O75132 1171 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 HMMRO75330 724 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 CD4P01730 458 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 COL9A1P20849 921 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 IGFBP4P22692 258 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 COPB2P35606 906 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 VWCEQ96DN2 955 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 INCENPQ9NQS7 918 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 ZNF536O15090 1300 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
HDAC6-219ENST00000476625 COL4A4P53420 1690 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 TNFRSF10AO00220 468 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 GPAA1O43292 621 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 PPIGQ13427 754 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■■■□□ 17.5
HDAC6-219ENST00000476625 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 CCDC174Q6PII3 467 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 OTOP2Q7RTS6 562 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 FBXO16Q8IX29 292 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 SCLYQ96I15 445 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 TRPV6Q9H1D0 765 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 A1CFQ9NQ94 594 aaKnown RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-219ENST00000476625 ELP1O95163 1332 aa14.31□□□□□ -0.12
HDAC6-219ENST00000476625 TANC1Q9C0D5 1861 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 RFXAPO00287 272 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 ATP2A1O14983 1001 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 SMPD1P17405 629 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 TDO2P48775 406 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 SLFN13Q68D06 897 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
HDAC6-219ENST00000476625 MICALL1Q8N3F8 863 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
HDAC6-219ENST00000476625 GAS2L1Q99501 681 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-219ENST00000476625 LRRCC1Q9C099 1032 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 ABHD16BQ9H3Z7 469 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 RNF146Q9NTX7 359 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 MTMR4Q9NYA4 1195 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 MTMR7Q9Y216 660 aa14.3□□□□□ -0.12
HDAC6-219ENST00000476625 B4GALT4O60513 344 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 NMT2O60551 498 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 TNFAIP2Q03169 654 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 KCTD1Q719H9 257 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 TLK2Q86UE8 772 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 TMEM199Q8N511 208 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 KBTBD3Q8NAB2 608 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 PCSK9Q8NBP7 692 aaKnown RBP14.29□□□□□ -0.12
HDAC6-219ENST00000476625 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-219ENST00000476625 ADAMTS19Q8TE59 1207 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 APPBP2Q92624 585 aa14.29□□□□□ -0.12
HDAC6-219ENST00000476625 HIPK3Q9H422 1215 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms