RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 COLQQ9Y215 455 aaPredicted RBP16.63■□□□□ 0.25
SLC6A8-209ENST00000476466 RAD50Q92878 1312 aa16.63■□□□□ 0.25
SLC6A8-209ENST00000476466 ADCY6O43306 1168 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 SNAI1O95863 264 aaPredicted RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 ZNF865P0CJ78 1059 aaPredicted RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 LRRC26Q2I0M4 334 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 BTNL9Q6UXG8 535 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 CHURC1Q8WUH1 139 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 ESR2Q92731 530 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 RANBP17Q9H2T7 1088 aaKnown RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 PRO3102Q9H379 93 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 RNF146Q9NTX7 359 aa16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 DIS3Q9Y2L1 958 aaKnown RBP16.62■□□□□ 0.25
SLC6A8-209ENST00000476466 SGSM2O43147 1006 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 CYP21A2P08686 494 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 CAPN2P17655 700 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 CYB5R4Q7L1T6 521 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 C7orf61Q8IZ16 206 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 CHST13Q8NET6 341 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
SLC6A8-209ENST00000476466 EVI5O60447 810 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 ALAS1P13196 640 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 FAM133AQ8N9E0 248 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 TTC14Q96N46 770 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 ACAD9Q9H845 621 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 SLC5A4Q9NY91 659 aa16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 CTDP1Q9Y5B0 961 aaPredicted RBP16.6■□□□□ 0.25
SLC6A8-209ENST00000476466 SOWAHBA6NEL2 793 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 MSCO60682 206 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 FDX1P10109 184 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 PTGS1P23219 599 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 MAMDC4Q6UXC1 1216 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 KATNBL1Q9H079 304 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 TNKSO95271 1327 aa16.59■□□□□ 0.25
SLC6A8-209ENST00000476466 DNM1LO00429 736 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 NFIBO00712 420 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 ICAM1P05362 532 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 SYN1P17600 705 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 LRRC41Q15345 812 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 SEC23AQ15436 765 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 ARMCX2Q7L311 632 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 FBXO40Q9UH90 709 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 SYNGAP1Q96PV0 1343 aa16.58■□□□□ 0.24
SLC6A8-209ENST00000476466 MYADML2A6NDP7 307 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 PGK1P00558 417 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 ATN1P54259 1190 aaPredicted RBP16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 CCDC144CPQ8IYA2 1237 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 CLEC4DQ8WXI8 215 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 SENP6Q9GZR1 1112 aaPredicted RBP16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
SLC6A8-209ENST00000476466 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 IQCA1Q86XH1 822 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 NR2E3Q9Y5X4 410 aa16.56■□□□□ 0.24
SLC6A8-209ENST00000476466 COL6A3P12111 3177 aa16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 ANTXR2P58335 489 aa16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
SLC6A8-209ENST00000476466 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms