RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
MRPL55-228ENST00000476267 FBXO40Q9UH90 709 aa15.61■□□□□ 0.09
MRPL55-228ENST00000476267 ZHX1Q9UKY1 873 aaPredicted RBP15.61■□□□□ 0.09
MRPL55-228ENST00000476267 CTAGE5O15320 804 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 PLA2G6O60733 806 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 PQBP1O60828 265 aaKnown RBP15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TSPY3P0CV98 308 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TSPY8P0CW00 308 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 FDX1P10109 184 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 MX1P20591 662 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TFAP4Q01664 338 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 KCNA10Q16322 511 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 ARMCX2Q7L311 632 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 ANKRD35Q8N283 1001 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 FAM133AQ8N9E0 248 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 FSD1Q9BTV5 496 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 NAPBQ9H115 298 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TTYH1Q9H313 450 aaPredicted RBP15.6■□□□□ 0.09
MRPL55-228ENST00000476267 ABHD16BQ9H3Z7 469 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 STARD7Q9NQZ5 370 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TBX21Q9UL17 535 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 VCANP13611 3396 aa15.6■□□□□ 0.09
MRPL55-228ENST00000476267 TMEM232C9JQI7 657 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 CDK7P50613 346 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 STAT2P52630 851 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 GJA9P57773 515 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 CCDC144BQ3MJ40 725 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 CCDC129Q6ZRS4 1044 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 RASGRP2Q7LDG7 609 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 A1CFQ9NQ94 594 aaKnown RBP15.59■□□□□ 0.09
MRPL55-228ENST00000476267 ANAPC4Q9UJX5 808 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 ASTN1O14525 1302 aa15.59■□□□□ 0.09
MRPL55-228ENST00000476267 SOWAHBA6NEL2 793 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 FGRP09769 529 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 RAG1P15918 1043 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 SLC4A3P48751 1232 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 CNTN2Q02246 1040 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 FAM160B2Q86V87 743 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 CCDC144CPQ8IYA2 1237 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 STAG1Q8WVM7 1258 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 AGBL1Q96MI9 1066 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 CDX2Q99626 313 aaPredicted RBP15.58■□□□□ 0.08
MRPL55-228ENST00000476267 ACAD9Q9H845 621 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 INCENPQ9NQS7 918 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 TMEM39AQ9NV64 488 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 ELP1O95163 1332 aa15.58■□□□□ 0.08
MRPL55-228ENST00000476267 NMT2O60551 498 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 ASGR1P07306 291 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 SLC3A2P08195 630 aaKnown RBP15.57■□□□□ 0.08
MRPL55-228ENST00000476267 FPGSQ05932 587 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 CTDSPL2Q05D32 466 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 VPS53Q5VIR6 699 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 HOMER2Q9NSB8 354 aa15.57■□□□□ 0.08
MRPL55-228ENST00000476267 CTDP1Q9Y5B0 961 aaPredicted RBP15.57■□□□□ 0.08
MRPL55-228ENST00000476267 TMEM265A0A087WTH1 108 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 DCDC2CA8MYV0 355 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 TIMP1P01033 207 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 MCCP23508 829 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 SLC1A4P43007 532 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 PCSK9Q8NBP7 692 aaKnown RBP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 CHURC1Q8WUH1 139 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 GLT1D1Q96MS3 346 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 RNF146Q9NTX7 359 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 GNEQ9Y223 722 aaKnown RBP15.56■□□□□ 0.08
MRPL55-228ENST00000476267 MROH7Q68CQ1 1323 aa15.56■□□□□ 0.08
MRPL55-228ENST00000476267 ORC4O43929 436 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
MRPL55-228ENST00000476267 ALX1Q15699 326 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 TKFCQ3LXA3 575 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 MUM1L1Q5H9M0 696 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 KCTD1Q719H9 257 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 FAM126BQ8IXS8 530 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 COL25A1Q9BXS0 654 aaPredicted RBP15.55■□□□□ 0.08
MRPL55-228ENST00000476267 PRR12Q9ULL5 1215 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 STX8Q9UNK0 236 aa15.55■□□□□ 0.08
MRPL55-228ENST00000476267 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
MRPL55-228ENST00000476267 TSPY2A6NKD2 308 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 ARVCFO00192 962 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 CD4P01730 458 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 RASIP1Q5U651 963 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 EVI5LQ96CN4 794 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 TRERF1Q96PN7 1200 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.54■□□□□ 0.082e-7■■■□□ 15.4
MRPL55-228ENST00000476267 CYP39A1Q9NYL5 469 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 DDX49Q9Y6V7 483 aaKnown RBP15.54■□□□□ 0.08
MRPL55-228ENST00000476267 CHD9Q3L8U1 2897 aa15.54■□□□□ 0.08
MRPL55-228ENST00000476267 ZMYM6O95789 1325 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms