RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 A0A1W2PQY0 241 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 TRIM43BA6NCK2 446 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 TRIM6-TRIM34B2RNG4 842 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 CLTBP09497 229 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 FDX1P10109 184 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
SATB1-213ENST00000476178 RAG1P15918 1043 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 SDSP20132 328 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 NOVP48745 357 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 ACLYP53396 1101 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 OAZ1P54368 228 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 ACVR2BQ13705 512 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 SNX17Q15036 470 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 SHHQ15465 462 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 KCNA10Q16322 511 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 MAMDC4Q6UXC1 1216 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 STAG1Q8WVM7 1258 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 TRIM43Q96BQ3 446 aaPredicted RBP9.97□□□□□ -0.81
SATB1-213ENST00000476178 FAM161BQ96MY7 647 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 TSEN34Q9BSV6 310 aaKnown RBP9.97□□□□□ -0.81
SATB1-213ENST00000476178 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.97□□□□□ -0.81
SATB1-213ENST00000476178 PARP14Q460N5 1801 aa9.97□□□□□ -0.81
SATB1-213ENST00000476178 COL11A1P12107 1806 aaPredicted RBP9.96□□□□□ -0.81
SATB1-213ENST00000476178 FRMPD3Q5JV73 1810 aa9.96□□□□□ -0.81
SATB1-213ENST00000476178 DNAJC25-GNG10A0A024R161 153 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 DLL1O00548 723 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ORC4O43929 436 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 NMT2O60551 498 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 DUSP11O75319 330 aaKnown RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 C6orf222P0C671 652 aaPredicted RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 ALAS1P13196 640 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 SNAP25P60880 206 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 CNTN2Q02246 1040 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 CCDC96Q2M329 555 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 CCDC144BQ3MJ40 725 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 RRP12Q5JTH9 1297 aaKnown RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 GNASQ5JWF2 1037 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 C9orf50Q5SZB4 431 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 RCSD1Q6JBY9 416 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 CCDC174Q6PII3 467 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 KCTD1Q719H9 257 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ARMCX2Q7L311 632 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 PCSK9Q8NBP7 692 aaKnown RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 GLT1D1Q96MS3 346 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 ACAD9Q9H845 621 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 RNF146Q9NTX7 359 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 STXBP5LQ9Y2K9 1186 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.82
SATB1-213ENST00000476178 RANBP2P49792 3224 aaKnown RBP9.96□□□□□ -0.82
SATB1-213ENST00000476178 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 ADAMTS4O75173 837 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 PDE4AP27815 886 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 IRX6P78412 446 aaPredicted RBP9.95□□□□□ -0.82
SATB1-213ENST00000476178 TKFCQ3LXA3 575 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 FAM109BQ6ICB4 259 aaPredicted RBP9.95□□□□□ -0.82
SATB1-213ENST00000476178 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 ZMYM6O95789 1325 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 CCDC171Q6TFL3 1326 aa9.95□□□□□ -0.82
SATB1-213ENST00000476178 ASB14A6NK59 587 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 KIAA0355O15063 1070 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 ASGR1P07306 291 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 TNFAIP2Q03169 654 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 FPGSQ05932 587 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 NSMFQ6X4W1 530 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 KLHDC9Q8NEP7 349 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
SATB1-213ENST00000476178 TOX2Q96NM4 488 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 TCP11L1Q9NUJ3 509 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 CCPG1Q9ULG6 757 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 PRR12Q9ULL5 1215 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 MYH4Q9Y623 1939 aa9.94□□□□□ -0.82
SATB1-213ENST00000476178 PLXNA1Q9UIW2 1896 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 ZNF536O15090 1300 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 ELP1O95163 1332 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 MYADML2A6NDP7 307 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 PLA2G6O60733 806 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 ITGB8P26012 769 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 SLC16A2P36021 539 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 GJA9P57773 515 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 HAND2P61296 217 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
SATB1-213ENST00000476178 FAAP100Q0VG06 881 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 CWC27Q6UX04 472 aaKnown RBP9.93□□□□□ -0.82
SATB1-213ENST00000476178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
SATB1-213ENST00000476178 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 ANKRD33Q7Z3H0 272 aa9.93□□□□□ -0.82
SATB1-213ENST00000476178 FAM133AQ8N9E0 248 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms