RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 RNF180Q86T96 592 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 FGD4Q96M96 766 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 SPTBN5Q9NRC6 3674 aaKnown RBP16.66■□□□□ 0.26
LSM10-202ENST00000476041 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
LSM10-202ENST00000476041 ATP11BQ9Y2G3 1177 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 ZNF536O15090 1300 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
LSM10-202ENST00000476041 ADAMTS4O75173 837 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 PGK1P00558 417 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 IKQ13123 557 aaPredicted RBP16.65■□□□□ 0.26
LSM10-202ENST00000476041 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 RILPL2Q969X0 211 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
LSM10-202ENST00000476041 MCM3APO60318 1980 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
LSM10-202ENST00000476041 SDSP20132 328 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 TKFCQ3LXA3 575 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 TRIM60Q495X7 471 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 LENG1Q96BZ8 264 aaPredicted RBP16.64■□□□□ 0.25
LSM10-202ENST00000476041 AGBL1Q96MI9 1066 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
LSM10-202ENST00000476041 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
LSM10-202ENST00000476041 FAM184BQ9ULE4 1060 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 PRR12Q9ULL5 1215 aa16.64■□□□□ 0.25
LSM10-202ENST00000476041 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
LSM10-202ENST00000476041 ABHD16BQ9H3Z7 469 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
LSM10-202ENST00000476041 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 ZHX1Q9UKY1 873 aaPredicted RBP16.63■□□□□ 0.25
LSM10-202ENST00000476041 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
LSM10-202ENST00000476041 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
LSM10-202ENST00000476041 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
LSM10-202ENST00000476041 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
LSM10-202ENST00000476041 HAND2P61296 217 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
LSM10-202ENST00000476041 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 BTNL9Q6UXG8 535 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 Q7L0L9 218 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 ARMCX2Q7L311 632 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
LSM10-202ENST00000476041 A0A1W2PQ45 241 aaPredicted RBP16.61■□□□□ 0.25
LSM10-202ENST00000476041 A0A1W2PQY0 241 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 CNTN2Q02246 1040 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 TLE2Q04725 743 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
LSM10-202ENST00000476041 CCDC174Q6PII3 467 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 TRERF1Q96PN7 1200 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 PRDM6Q9NQX0 595 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 PDLIM7Q9NR12 457 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 MTMR7Q9Y216 660 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 LAMA4Q16363 1823 aa16.61■□□□□ 0.25
LSM10-202ENST00000476041 MOXD2PA6NHM9 499 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 ADCY6O43306 1168 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 ALAS1P13196 640 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 CST5P28325 142 aaPredicted RBP16.6■□□□□ 0.25
LSM10-202ENST00000476041 ACLYP53396 1101 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 SNAP25P60880 206 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 CCDC144BQ3MJ40 725 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 TTBK2Q6IQ55 1244 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
LSM10-202ENST00000476041 DEFB123Q8N688 67 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 TTC14Q96N46 770 aa16.6■□□□□ 0.25
LSM10-202ENST00000476041 RANBP17Q9H2T7 1088 aaKnown RBP16.6■□□□□ 0.25
LSM10-202ENST00000476041 RNF41Q9H4P4 317 aaPredicted RBP16.6■□□□□ 0.25
LSM10-202ENST00000476041 PRDM5Q9NQX1 630 aaPredicted RBP16.6■□□□□ 0.25
LSM10-202ENST00000476041 TRIM43BA6NCK2 446 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 SOWAHBA6NEL2 793 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 HIP1O00291 1037 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 ICAM1P05362 532 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 NT5C2P49902 561 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 SH3RF1Q7Z6J0 888 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 TRIM43Q96BQ3 446 aaPredicted RBP16.59■□□□□ 0.25
LSM10-202ENST00000476041 UPF3AQ9H1J1 476 aaKnown RBP16.59■□□□□ 0.25
LSM10-202ENST00000476041 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
LSM10-202ENST00000476041 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms