RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 DNAJC2Q99543 621 aaKnown RBP24.4■■□□□ 1.5
HDAC11-217ENST00000475818 WNT8AQ9H1J5 351 aa24.4■■□□□ 1.5
HDAC11-217ENST00000475818 MTCH2Q9Y6C9 303 aa24.4■■□□□ 1.5
HDAC11-217ENST00000475818 CHD7Q9P2D1 2997 aa24.39■■□□□ 1.5
HDAC11-217ENST00000475818 XIRP2A4UGR9 3374 aa24.39■■□□□ 1.5
HDAC11-217ENST00000475818 GOLIM4O00461 696 aa24.39■■□□□ 1.49
HDAC11-217ENST00000475818 GTPBP6O43824 516 aaPredicted RBP24.39■■□□□ 1.49
HDAC11-217ENST00000475818 SLFNL1Q499Z3 407 aa24.39■■□□□ 1.49
HDAC11-217ENST00000475818 KRT40Q6A162 431 aa24.39■■□□□ 1.49
HDAC11-217ENST00000475818 NOC4LQ9BVI4 516 aaKnown RBP24.39■■□□□ 1.49
HDAC11-217ENST00000475818 TRPV6Q9H1D0 765 aa24.39■■□□□ 1.49
HDAC11-217ENST00000475818 MYH8P13535 1937 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.38■■□□□ 1.49
HDAC11-217ENST00000475818 MBD4O95243 580 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 ATP2A2P16615 1042 aaKnown RBP24.38■■□□□ 1.49
HDAC11-217ENST00000475818 C12orf60Q5U649 245 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 C16orf86Q6ZW13 317 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 ANKRD35Q8N283 1001 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 SLC43A3Q8NBI5 491 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 KHSRPQ92945 711 aaKnown RBP eCLIP24.38■■□□□ 1.49
HDAC11-217ENST00000475818 SCLYQ96I15 445 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 RAVER2Q9HCJ3 691 aaKnown RBP24.38■■□□□ 1.49
HDAC11-217ENST00000475818 EXOC6BQ9Y2D4 811 aa24.38■■□□□ 1.49
HDAC11-217ENST00000475818 USP17L12C9JPN9 530 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 USP17L21D6R901 530 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 CA3P07451 260 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 PTGS1P23219 599 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 ITGA7Q13683 1181 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 CCDC144CPQ8IYA2 1237 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 IL1RAPL2Q9NP60 686 aa24.37■■□□□ 1.49
HDAC11-217ENST00000475818 CTDP1Q9Y5B0 961 aaPredicted RBP24.37■■□□□ 1.49
HDAC11-217ENST00000475818 ASTN1O14525 1302 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 EPOPA6NHQ4 379 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 TLL1O43897 1013 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 B4GALT4O60513 344 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 TNFAIP2Q03169 654 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 AMOTL1Q8IY63 956 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 RPUSD2Q8IZ73 545 aaKnown RBP24.36■■□□□ 1.49
HDAC11-217ENST00000475818 KATNBL1Q9H079 304 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 C11orf16Q9NQ32 467 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 ATP8A2Q9NTI2 1148 aa24.36■■□□□ 1.49
HDAC11-217ENST00000475818 PRRC2BQ5JSZ5 2229 aaKnown RBP24.36■■□□□ 1.49
HDAC11-217ENST00000475818 GRIN2DO15399 1336 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 ZBED4O75132 1171 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 PSMC6P62333 389 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 TTLL4Q14679 1199 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 TMEM67Q5HYA8 995 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 KIFC2Q96AC6 838 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 VWCEQ96DN2 955 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.35■■□□□ 1.49
HDAC11-217ENST00000475818 COG5Q9UP83 839 aa24.35■■□□□ 1.49
HDAC11-217ENST00000475818 CABYRO75952 493 aa24.34■■□□□ 1.49
HDAC11-217ENST00000475818 TLK2Q86UE8 772 aa24.34■■□□□ 1.49
HDAC11-217ENST00000475818 ALYREFQ86V81 257 aaKnown RBP24.34■■□□□ 1.49
HDAC11-217ENST00000475818 PRPF38AQ8NAV1 312 aaKnown RBP24.34■■□□□ 1.49
HDAC11-217ENST00000475818 BCL11AQ9H165 835 aa24.34■■□□□ 1.49
HDAC11-217ENST00000475818 LRRC37A2A6NM11 1700 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 NDUFB10O96000 172 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 POU3F3P20264 500 aaPredicted RBP24.33■■□□□ 1.49
HDAC11-217ENST00000475818 NKX3-2P78367 333 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 CNTN2Q02246 1040 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 FSCN1Q16658 493 aaKnown RBP24.33■■□□□ 1.49
HDAC11-217ENST00000475818 ARNTL2Q8WYA1 636 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 HOMER2Q9NSB8 354 aa24.33■■□□□ 1.49
HDAC11-217ENST00000475818 MCM3APO60318 1980 aa24.33■■□□□ 1.48
HDAC11-217ENST00000475818 REV3LO60673 3130 aa24.33■■□□□ 1.48
HDAC11-217ENST00000475818 BAZ2AQ9UIF9 1905 aaKnown RBP24.32■■□□□ 1.48
HDAC11-217ENST00000475818 F5H6K3 240 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 ATP2A1O14983 1001 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 GPR37L1O60883 481 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 KLRC3Q07444 240 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 ZKSCAN2Q63HK3 967 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 DEFB128Q7Z7B8 93 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 ERC1Q8IUD2 1116 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 HLA-CQ95604 372 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 AGBL1Q96MI9 1066 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 AP5M1Q9H0R1 490 aa24.32■■□□□ 1.48
HDAC11-217ENST00000475818 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
HDAC11-217ENST00000475818 DYNC1LI2O43237 492 aaPredicted RBP24.31■■□□□ 1.48
HDAC11-217ENST00000475818 STK11IPQ8N1F8 1099 aa24.31■■□□□ 1.48
HDAC11-217ENST00000475818 FBXO40Q9UH90 709 aa24.31■■□□□ 1.48
HDAC11-217ENST00000475818 GNEQ9Y223 722 aaKnown RBP24.31■■□□□ 1.48
HDAC11-217ENST00000475818 DDX49Q9Y6V7 483 aaKnown RBP24.31■■□□□ 1.48
HDAC11-217ENST00000475818 PIEZO1Q92508 2521 aa24.31■■□□□ 1.48
HDAC11-217ENST00000475818 ARHGEF15O94989 841 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 CHGBP05060 677 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 ADD2P35612 726 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.3■■□□□ 1.48
HDAC11-217ENST00000475818 ITPRIPQ8IWB1 547 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 CHST13Q8NET6 341 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 DDRGK1Q96HY6 314 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 SLC38A10Q9HBR0 1119 aa24.3■■□□□ 1.48
HDAC11-217ENST00000475818 MUC6Q6W4X9 2439 aa24.29■■□□□ 1.48
HDAC11-217ENST00000475818 ZEB2O60315 1214 aa24.29■■□□□ 1.48
HDAC11-217ENST00000475818 SMPD1P17405 629 aa24.29■■□□□ 1.48
HDAC11-217ENST00000475818 CTR9Q6PD62 1173 aa24.29■■□□□ 1.48
HDAC11-217ENST00000475818 SLC4A4Q9Y6R1 1079 aa24.29■■□□□ 1.48
HDAC11-217ENST00000475818 CYP2C9P11712 490 aa24.28■■□□□ 1.48
HDAC11-217ENST00000475818 CEP85Q6P2H3 762 aa24.28■■□□□ 1.48
HDAC11-217ENST00000475818 ALDH8A1Q9H2A2 487 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms