RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 OAZ1P54368 228 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 SCRN1Q12765 414 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 CDC37Q16543 378 aaPredicted RBP25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 Q3C1V9 767 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 SPATC1LQ9H0A9 340 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 VAT1LQ9HCJ6 419 aa25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 CTDP1Q9Y5B0 961 aaPredicted RBP25.75■■□□□ 1.71
MCF2L2-209ENST00000475664 MGAMO43451 1857 aa25.74■■□□□ 1.71
MCF2L2-209ENST00000475664 NTRK3Q16288 839 aa25.74■■□□□ 1.71
MCF2L2-209ENST00000475664 RAVER2Q9HCJ3 691 aaKnown RBP25.74■■□□□ 1.71
MCF2L2-209ENST00000475664 SMCHD1A6NHR9 2005 aa25.74■■□□□ 1.71
MCF2L2-209ENST00000475664 ZSWIM8A7E2V4 1837 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 FOXN1O15353 648 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 MCM2P49736 904 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 CCDC174Q6PII3 467 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 CPXCR1Q8N123 301 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 CCDC82Q8N4S0 544 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 GTF3C6Q969F1 213 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 ZSCAN31Q96LW9 406 aaPredicted RBP25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 PIGSQ96S52 555 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 MOV10L1Q9BXT6 1211 aaKnown RBP25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 TEX13BQ9BXU2 312 aa25.73■■□□□ 1.71
MCF2L2-209ENST00000475664 ICAM1P05362 532 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 STAT3P40763 770 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 SP3Q02447 781 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 PLS1Q14651 629 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 QRICH1Q2TAL8 776 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 RIOX2Q8IUF8 465 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 NECAB1Q8N987 351 aa25.72■■□□□ 1.71
MCF2L2-209ENST00000475664 ZBTB5O15062 677 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 HSPA8P11142 646 aaKnown RBP25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 IFNAR1P17181 557 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 CCNA1P78396 465 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 ST3GAL1Q11201 340 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 SNRNP48Q6IEG0 339 aaKnown RBP25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 HOMER1Q86YM7 354 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 AGBL1Q96MI9 1066 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 PORCNQ9H237 461 aa25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 SH2B1Q9NRF2 756 aaPredicted RBP25.71■■□□□ 1.71
MCF2L2-209ENST00000475664 SHCBP1Q8NEM2 672 aa25.7■■□□□ 1.7
MCF2L2-209ENST00000475664 ZNF296Q8WUU4 475 aaPredicted RBP25.7■■□□□ 1.7
MCF2L2-209ENST00000475664 RRP36Q96EU6 259 aaKnown RBP25.7■■□□□ 1.7
MCF2L2-209ENST00000475664 RIPK3Q9Y572 518 aa25.7■■□□□ 1.7
MCF2L2-209ENST00000475664 PNMA6FA0A0J9YX94 578 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 CPLX1O14810 134 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 PPP1R11O60927 126 aaPredicted RBP25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 FKTNO75072 461 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 LACTBP83111 547 aaPredicted RBP25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 PIBF1Q8WXW3 757 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 PNMA2Q9UL42 364 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 CCPG1Q9ULG6 757 aa25.69■■□□□ 1.7
MCF2L2-209ENST00000475664 PLXNB2O15031 1838 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 SLC25A27O95847 323 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 TAL1P17542 331 aaPredicted RBP25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 COPB2P35606 906 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 CPLX2Q6PUV4 134 aaKnown RBP25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 PHKBQ93100 1093 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 TMX3Q96JJ7 454 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 EFCC1Q9HA90 598 aa25.68■■□□□ 1.7
MCF2L2-209ENST00000475664 hCG_1642624A0A1W2PR95 340 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 CTDNEP1O95476 244 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 ERCC3P19447 782 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 CTGFP29279 349 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 CTCFP49711 727 aaPredicted RBP25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 FBXO11Q86XK2 927 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 AMNQ9BXJ7 453 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 RNF26Q9BY78 433 aaPredicted RBP25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 MROH8Q9H579 483 aa25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 SEC63Q9UGP8 760 aaKnown RBP25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 V9GY48 417 aaPredicted RBP25.67■■□□□ 1.7
MCF2L2-209ENST00000475664 CASP8AP2Q9UKL3 1982 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 PRPF3O43395 683 aaKnown RBP25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 MAPK4P31152 587 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 CAP1Q01518 475 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 TKFCQ3LXA3 575 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 NCAPG2Q86XI2 1143 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 CCDC83Q8IWF9 413 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 CD99L2Q8TCZ2 262 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 SNX21Q969T3 373 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 ARHGAP39Q9C0H5 1083 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 RBBP6Q7Z6E9 1792 aaKnown RBP25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 DOCK3Q8IZD9 2030 aa25.66■■□□□ 1.7
MCF2L2-209ENST00000475664 CDKL5O76039 1030 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 FMNL1O95466 1100 aaPredicted RBP25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 ALAS1P13196 640 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 SLC4A3P48751 1232 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 USH1GQ495M9 461 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 ERO1AQ96HE7 468 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 SLC26A6Q9BXS9 759 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 RNF146Q9NTX7 359 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 RBM27Q9P2N5 1060 aaKnown RBP25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 ZNF236Q9UL36 1845 aa25.65■■□□□ 1.7
MCF2L2-209ENST00000475664 ABCB11O95342 1321 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 PPFIA3O75145 1194 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 FCGRTP55899 365 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 KIF22Q14807 665 aa25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 CCAR1Q8IX12 1150 aaKnown RBP25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 NSUN7Q8NE18 718 aaKnown RBP25.64■■□□□ 1.7
MCF2L2-209ENST00000475664 CHST13Q8NET6 341 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms