RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 TMEM265A0A087WTH1 108 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 SLFN13Q68D06 897 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDPF1-206ENST00000475605 CCDC144CPQ8IYA2 1237 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 SEC62Q99442 399 aaKnown RBP18.75■□□□□ 0.59
CDPF1-206ENST00000475605 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 UPF3AQ9H1J1 476 aaKnown RBP18.75■□□□□ 0.59
CDPF1-206ENST00000475605 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
CDPF1-206ENST00000475605 ELP1O95163 1332 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 GRXCR1A8MXD5 290 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 CTAGE5O15320 804 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 TTLL1O95922 423 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 GJA9P57773 515 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 GNASQ5JWF2 1037 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 USP38Q8NB14 1042 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 PCSK9Q8NBP7 692 aaKnown RBP18.74■□□□□ 0.59
CDPF1-206ENST00000475605 GMCL1P1Q8NEA9 526 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 CHST13Q8NET6 341 aa18.74■□□□□ 0.59
CDPF1-206ENST00000475605 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.73■□□□□ 0.59
CDPF1-206ENST00000475605 PATL2C9JE40 543 aaKnown RBP18.73■□□□□ 0.59
CDPF1-206ENST00000475605 TMEM232C9JQI7 657 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 ARVCFO00192 962 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 ACRP10323 421 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 BMP3P12645 472 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 CSF2RAP15509 400 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 GNAT2P19087 354 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 PTGS1P23219 599 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 PBX2P40425 430 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 BEX3Q00994 111 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 TMEM240Q5SV17 173 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 NEDD1Q8NHV4 660 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 ZNF576Q9H609 170 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 DCTPP1Q9H773 170 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 FBXO40Q9UH90 709 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 DDX49Q9Y6V7 483 aaKnown RBP18.73■□□□□ 0.59
CDPF1-206ENST00000475605 SPTBN5Q9NRC6 3674 aaKnown RBP18.73■□□□□ 0.59
CDPF1-206ENST00000475605 MROH7Q68CQ1 1323 aa18.73■□□□□ 0.59
CDPF1-206ENST00000475605 A0A0U1RQG5 324 aaPredicted RBP18.72■□□□□ 0.59
CDPF1-206ENST00000475605 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
CDPF1-206ENST00000475605 OAZ1P54368 228 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 FAM126BQ8IXS8 530 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 TIFAQ96CG3 184 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 AGBL1Q96MI9 1066 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 SPC25Q9HBM1 224 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
CDPF1-206ENST00000475605 ASTN1O14525 1302 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 ZNF536O15090 1300 aa18.72■□□□□ 0.59
CDPF1-206ENST00000475605 SOWAHBA6NEL2 793 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 TSPY3P0CV98 308 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 TSPY8P0CW00 308 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 TFAP4Q01664 338 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 PPIGQ13427 754 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDPF1-206ENST00000475605 ZNF365Q70YC5 407 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 FAM133AQ8N9E0 248 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 PBX4Q9BYU1 374 aa18.71■□□□□ 0.59
CDPF1-206ENST00000475605 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
CDPF1-206ENST00000475605 PRUNE2Q8WUY3 3088 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 CYP2C18P33260 490 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 SNAP25P60880 206 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 TNFAIP2Q03169 654 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 CRBNQ96SW2 442 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 ACAD9Q9H845 621 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 RNF146Q9NTX7 359 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 SYNPO2Q9UMS6 1093 aa18.7■□□□□ 0.58
CDPF1-206ENST00000475605 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
CDPF1-206ENST00000475605 CD4P01730 458 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 MCCP23508 829 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 STAT2P52630 851 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 PDE4BQ07343 736 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 PPARAQ07869 468 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
CDPF1-206ENST00000475605 RASGRP2Q7LDG7 609 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 TMEM199Q8N511 208 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 OTUD7AQ8TE49 926 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-206ENST00000475605 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
CDPF1-206ENST00000475605 ALAS1P13196 640 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 NKX3-2P78367 333 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
CDPF1-206ENST00000475605 AAMPQ13685 434 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 CCDC174Q6PII3 467 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 GMCL1Q96IK5 515 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 TRERF1Q96PN7 1200 aa18.68■□□□□ 0.58
CDPF1-206ENST00000475605 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms