RNA–Protein interactions for RNA: ENST00000475501.1

LRP8-208, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-208ENST00000475501 Q9Y3F1 56 aa10.64□□□□□ -0.71
LRP8-208ENST00000475501 RIPK3Q9Y572 518 aa10.64□□□□□ -0.71
LRP8-208ENST00000475501 A0A1W2PQ45 241 aaPredicted RBP10.63□□□□□ -0.71
LRP8-208ENST00000475501 A0A1W2PQY0 241 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 DCDC2CA8MYV0 355 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 CABYRO75952 493 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 ACLYP53396 1101 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 PDE1AP54750 535 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
LRP8-208ENST00000475501 GJA9P57773 515 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 TLE2Q04725 743 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 ANKRD45Q5TZF3 282 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 CCDC129Q6ZRS4 1044 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 FAM133AQ8N9E0 248 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 SLC17A8Q8NDX2 589 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 DCAF4Q8WV16 495 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 GLT1D1Q96MS3 346 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 TTC14Q96N46 770 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
LRP8-208ENST00000475501 RAVER2Q9HCJ3 691 aaKnown RBP10.63□□□□□ -0.71
LRP8-208ENST00000475501 STARD7Q9NQZ5 370 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
LRP8-208ENST00000475501 COL6A3P12111 3177 aa10.63□□□□□ -0.71
LRP8-208ENST00000475501 SYNRGQ9UMZ2 1314 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 PGK1P00558 417 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
LRP8-208ENST00000475501 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 BTNL9Q6UXG8 535 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 LRRC47Q8N1G4 583 aaKnown RBP10.62□□□□□ -0.71
LRP8-208ENST00000475501 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 CUL9Q8IWT3 2517 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
LRP8-208ENST00000475501 ZNF536O15090 1300 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 LCTP09848 1927 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 MYH6P13533 1939 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 FOXP2O15409 715 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 TOP1P11387 765 aaKnown RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 RAG1P15918 1043 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 CDK7P50613 346 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 KCNA10Q16322 511 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 CCDC144BQ3MJ40 725 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 CCDC178Q5BJE1 867 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 ZNF697Q5TEC3 545 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 STK11IPQ8N1F8 1099 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 OTUD7AQ8TE49 926 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 MORC4Q8TE76 937 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 BADQ92934 168 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 FGD4Q96M96 766 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 RWDD1Q9H446 243 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 A1CFQ9NQ94 594 aaKnown RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 RNF146Q9NTX7 359 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
LRP8-208ENST00000475501 LRRC37A2A6NM11 1700 aa10.61□□□□□ -0.71
LRP8-208ENST00000475501 A0A0U1RQG5 324 aaPredicted RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 TLR3O15455 904 aaKnown RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 ZEB2O60315 1214 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 RANBP6O60518 1105 aaKnown RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 TIMP1P01033 207 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 FGAP02671 866 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 ICAM1P05362 532 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 MCCP23508 829 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 FPGSQ05932 587 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 FAAP100Q0VG06 881 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 IKQ13123 557 aaPredicted RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 SHHQ15465 462 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 SMC5Q8IY18 1101 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 CCDC144CPQ8IYA2 1237 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 TRERF1Q96PN7 1200 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
LRP8-208ENST00000475501 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 PRR12Q9ULL5 1215 aa10.6□□□□□ -0.71
LRP8-208ENST00000475501 ARVCFO00192 962 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 HIP1O00291 1037 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 ASGR1P07306 291 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 C6orf222P0C671 652 aaPredicted RBP10.59□□□□□ -0.71
LRP8-208ENST00000475501 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
LRP8-208ENST00000475501 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 PPIGQ13427 754 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■■■□ 23.4
LRP8-208ENST00000475501 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
LRP8-208ENST00000475501 VTA1Q9NP79 307 aa10.59□□□□□ -0.71
LRP8-208ENST00000475501 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms