RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 COG6Q9Y2V7 657 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 SPTBN4Q9H254 2564 aa17.01■□□□□ 0.31
ATG9A-220ENST00000475339 PTPRZ1P23471 2315 aaPredicted RBP17.01■□□□□ 0.31
ATG9A-220ENST00000475339 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
ATG9A-220ENST00000475339 ITGA7Q13683 1181 aa17■□□□□ 0.31
ATG9A-220ENST00000475339 PTCRAQ6ISU1 281 aaPredicted RBP17■□□□□ 0.31
ATG9A-220ENST00000475339 CLEC10AQ8IUN9 316 aa17■□□□□ 0.31
ATG9A-220ENST00000475339 SLC9A7Q96T83 725 aa17■□□□□ 0.31
ATG9A-220ENST00000475339 CDKN2AIPQ9NXV6 580 aaPredicted RBP17■□□□□ 0.31
ATG9A-220ENST00000475339 EVX2Q03828 476 aa16.99■□□□□ 0.31
ATG9A-220ENST00000475339 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
ATG9A-220ENST00000475339 HERC6Q8IVU3 1022 aa16.99■□□□□ 0.31
ATG9A-220ENST00000475339 GDPD5Q8WTR4 605 aa16.99■□□□□ 0.31
ATG9A-220ENST00000475339 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
ATG9A-220ENST00000475339 ZNF536O15090 1300 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 ZFHX2Q9C0A1 2572 aaPredicted RBP16.98■□□□□ 0.31
ATG9A-220ENST00000475339 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 GRXCR2A6NFK2 248 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 VWA5AO00534 786 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 PFKMP08237 780 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 GABPAQ06546 454 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 PRSS33Q8NF86 280 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 PHOSPHO2Q8TCD6 241 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 MFSD14AQ96MC6 490 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 ABHD16BQ9H3Z7 469 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 PIH1D3Q9NQM4 214 aaKnown RBP16.98■□□□□ 0.31
ATG9A-220ENST00000475339 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
ATG9A-220ENST00000475339 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
ATG9A-220ENST00000475339 DNAJC25-GNG10A0A024R161 153 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 WDR46O15213 610 aaKnown RBP16.97■□□□□ 0.31
ATG9A-220ENST00000475339 POLR3DP05423 398 aaPredicted RBP16.97■□□□□ 0.31
ATG9A-220ENST00000475339 PSMC6P62333 389 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 NKX3-2P78367 333 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
ATG9A-220ENST00000475339 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
ATG9A-220ENST00000475339 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
ATG9A-220ENST00000475339 ASTN1O14525 1302 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 LCHNA4D1U4 455 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 CABYRO75952 493 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 ACTN1P12814 892 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 COPB2P35606 906 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 TMEM179Q6ZVK1 233 aa16.96■□□□□ 0.31
ATG9A-220ENST00000475339 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
ATG9A-220ENST00000475339 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
ATG9A-220ENST00000475339 COL4A4P53420 1690 aaPredicted RBP16.95■□□□□ 0.3
ATG9A-220ENST00000475339 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
ATG9A-220ENST00000475339 CYP2C9P11712 490 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 PTGS1P23219 599 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 ZAP70P43403 619 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
ATG9A-220ENST00000475339 IER5LQ5T953 404 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 ZNF467Q7Z7K2 595 aaPredicted RBP16.95■□□□□ 0.3
ATG9A-220ENST00000475339 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 ARHGEF10LQ9HCE6 1279 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 PPP1R9AQ9ULJ8 1098 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 PARP14Q460N5 1801 aa16.95■□□□□ 0.3
ATG9A-220ENST00000475339 GFRA3O60609 400 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 ICA1Q05084 483 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 POLA2Q14181 598 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 FSCN1Q16658 493 aaKnown RBP16.94■□□□□ 0.3
ATG9A-220ENST00000475339 ARMCX2Q7L311 632 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 FGD4Q96M96 766 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 KATNBL1Q9H079 304 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 ALDH8A1Q9H2A2 487 aaPredicted RBP16.94■□□□□ 0.3
ATG9A-220ENST00000475339 TRMT13Q9NUP7 481 aaKnown RBP16.94■□□□□ 0.3
ATG9A-220ENST00000475339 MCM3APO60318 1980 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 CACNA1HO95180 2353 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
ATG9A-220ENST00000475339 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-220ENST00000475339 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
ATG9A-220ENST00000475339 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
ATG9A-220ENST00000475339 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 PTPN5P54829 565 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 ZP2Q05996 745 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 CCDC158Q5M9N0 1113 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 TMCO2Q7Z6W1 182 aaPredicted RBP16.93■□□□□ 0.3
ATG9A-220ENST00000475339 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 SEZ6LQ9BYH1 1024 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 SH2D4AQ9H788 454 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 TRIOO75962 3097 aa16.93■□□□□ 0.3
ATG9A-220ENST00000475339 HMMRO75330 724 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 PUS10Q3MIT2 529 aaKnown RBP16.92■□□□□ 0.3
ATG9A-220ENST00000475339 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
ATG9A-220ENST00000475339 TLK2Q86UE8 772 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 CCDC144CPQ8IYA2 1237 aa16.92■□□□□ 0.3
ATG9A-220ENST00000475339 DBNDD2Q9BQY9 259 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms