RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 RNF146Q9NTX7 359 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 BRCA2P51587 3418 aa13.49□□□□□ -0.25
GPM6B-208ENST00000475307 B4E1Z4 1266 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
GPM6B-208ENST00000475307 RARBP10826 455 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 AKR1A1P14550 325 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 TAL1P17542 331 aaPredicted RBP13.48□□□□□ -0.25
GPM6B-208ENST00000475307 SYN1P17600 705 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 SLC16A2P36021 539 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 NT5C2P49902 561 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
GPM6B-208ENST00000475307 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
GPM6B-208ENST00000475307 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
GPM6B-208ENST00000475307 CCPG1Q9ULG6 757 aa13.48□□□□□ -0.25
GPM6B-208ENST00000475307 RAD50Q92878 1312 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
GPM6B-208ENST00000475307 PDHBP11177 359 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
GPM6B-208ENST00000475307 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 KRT23Q9C075 422 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 IL25Q9H293 177 aa13.47□□□□□ -0.25
GPM6B-208ENST00000475307 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
GPM6B-208ENST00000475307 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
GPM6B-208ENST00000475307 ICAM1P05362 532 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 CHMLP26374 656 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 ZNF543Q08ER8 600 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 LRRC41Q15345 812 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 RNF180Q86T96 592 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
GPM6B-208ENST00000475307 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 CNNM2Q9H8M5 875 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
GPM6B-208ENST00000475307 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
GPM6B-208ENST00000475307 PGK1P00558 417 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 MUM1L1Q5H9M0 696 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 CCDC144CPQ8IYA2 1237 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 FERMT2Q96AC1 680 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
GPM6B-208ENST00000475307 FGD4Q96M96 766 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 ZSWIM5Q9P217 1185 aa13.45□□□□□ -0.26
GPM6B-208ENST00000475307 TNKSO95271 1327 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 ASB14A6NK59 587 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 GOLGA8HP0CJ92 632 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.26
GPM6B-208ENST00000475307 RTP1P59025 263 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 TRDNQ13061 729 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
GPM6B-208ENST00000475307 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 ANKS1AQ92625 1134 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
GPM6B-208ENST00000475307 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
GPM6B-208ENST00000475307 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 SGSM2O43147 1006 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 MAGEA10P43363 369 aaPredicted RBP13.43□□□□□ -0.26
GPM6B-208ENST00000475307 PTH1RQ03431 593 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 CCDC144BQ3MJ40 725 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 ENAHQ8N8S7 591 aaPredicted RBP13.43□□□□□ -0.26
GPM6B-208ENST00000475307 GDF15Q99988 308 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 PRKAG2Q9UGJ0 569 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
GPM6B-208ENST00000475307 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
GPM6B-208ENST00000475307 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 A0A1W2PPC1 479 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 NFIBO00712 420 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
GPM6B-208ENST00000475307 BMP8BP34820 402 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
GPM6B-208ENST00000475307 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
GPM6B-208ENST00000475307 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 CPVLQ9H3G5 476 aa13.42□□□□□ -0.26
GPM6B-208ENST00000475307 SPC25Q9HBM1 224 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms