RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 NMT2O60551 498 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 PLA2G6O60733 806 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 COBLO75128 1261 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 RUFY2Q8WXA3 655 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 DPF3Q92784 378 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 TTC14Q96N46 770 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 MKI67P46013 3256 aaKnown RBP13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 PLXNB2O15031 1838 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 IGHA2P01877 340 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 CCND3P30281 292 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 CYP2C19P33261 490 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 RCSD1Q6JBY9 416 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 FAM43BQ6ZT52 329 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 PAWRQ96IZ0 340 aaKnown RBP13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 FBXO40Q9UH90 709 aa13.53□□□□□ -0.24
HLA-DOB-208ENST00000475235 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.24
HLA-DOB-208ENST00000475235 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 LHX8Q68G74 356 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 CHST13Q8NET6 341 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 DDX20Q9UHI6 824 aaKnown RBP13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 NRBP1Q9UHY1 535 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 RLFQ13129 1914 aa13.52□□□□□ -0.25
HLA-DOB-208ENST00000475235 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 CYBAP13498 195 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 CNGA1P29973 690 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 IQCA1Q86XH1 822 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 TMEM47Q9BQJ4 181 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 C11orf49Q9H6J7 331 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 RAVER2Q9HCJ3 691 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
HLA-DOB-208ENST00000475235 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 MSL3Q8N5Y2 521 aaKnown RBP13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 RIPK3Q9Y572 518 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 NEDD4P46934 1319 aa13.5□□□□□ -0.25
HLA-DOB-208ENST00000475235 SEPT4O43236 478 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 PGK2P07205 417 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 CHMLP26374 656 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 TKFCQ3LXA3 575 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 KRT23Q9C075 422 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 PRR12Q9ULL5 1215 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 MTMR7Q9Y216 660 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 EVI5O60447 810 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 KDM4AO75164 1064 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 IL25Q9H293 177 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 ACAD9Q9H845 621 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
HLA-DOB-208ENST00000475235 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 H0YGN5 161 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 PDHBP11177 359 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 CNPY2Q9Y2B0 182 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 ZNF536O15090 1300 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 SYNGAP1Q96PV0 1343 aa13.48□□□□□ -0.25
HLA-DOB-208ENST00000475235 PARP14Q460N5 1801 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 B4E1Z4 1266 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 DNM1LO00429 736 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 SGSM2O43147 1006 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 COL6A1P12109 1028 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 TRDNQ13061 729 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 ARRDC4Q8NCT1 418 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 ANKS1AQ92625 1134 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
HLA-DOB-208ENST00000475235 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms