RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 BCAS4Q8TDM0 211 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 STX8Q9UNK0 236 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 MOCS3O95396 460 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 GNAT2P19087 354 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 USP5P45974 858 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 PDE4DQ08499 809 aa13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 ZNF658Q5TYW1 1059 aaPredicted RBP13.51□□□□□ -0.25
SKIV2L-208ENST00000474839 EXOC5O00471 708 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 KRT83P78385 493 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 CHRNDQ07001 517 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 ALX1Q15699 326 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 HPCAL4Q9UM19 191 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 GNGT1P63211 74 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 LETM2Q2VYF4 491 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 SLC39A2Q9NP94 309 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 MED4Q9NPJ6 270 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 LIMA1Q9UHB6 759 aaKnown RBP13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
SKIV2L-208ENST00000474839 ESYT3A0FGR9 886 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 RTL9Q8NET4 1388 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 NKRFO15226 690 aaKnown RBP eCLIP13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 SCG2P13521 617 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 NFRKBQ6P4R8 1299 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 DMGDHQ9UI17 866 aaKnown RBP13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 H7C1D1 291 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 KCNQ2O43526 872 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 SSBP05455 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 FCER1AP12319 257 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 COG1Q8WTW3 980 aa13.49□□□□□ -0.25
SKIV2L-208ENST00000474839 EBAG9O00559 213 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 ATP2C1P98194 919 aaPredicted RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TRIM28Q13263 835 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TUBB2AQ13885 445 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TUBB2BQ9BVA1 445 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 TMEM60Q9H2L4 133 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 MAGEA9P43362 315 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 MNAT1P51948 309 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 AMPD2Q01433 879 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 SEC23AQ15436 765 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 WDR59Q6PJI9 974 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 EXOC1Q9NV70 894 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 NWD2Q9ULI1 1742 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 BMP15O95972 392 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-208ENST00000474839 PPFIA4O75335 1185 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 TROAPQ12815 778 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 TRIM14Q14142 442 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 RNF187Q5TA31 235 aaPredicted RBP13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 RRAGAQ7L523 313 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 PLA2G12BQ9BX93 195 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 USO1O60763 962 aaKnown RBP13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 TECP42680 631 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 PDCLQ13371 301 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 DDB1Q16531 1140 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 FBXW10Q5XX13 1052 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
SKIV2L-208ENST00000474839 PPM1EQ8WY54 764 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms