RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RUFY3Q7L099 469 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 SGMS1Q86VZ5 419 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 FBXL16Q8N461 479 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 REPS2Q8NFH8 660 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 MYL10Q9BUA6 226 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 C22orf23Q9BZE7 217 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 CPVLQ9H3G5 476 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 SH2D4AQ9H788 454 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
LIMD1-204ENST00000474665 TMOD4Q9NZQ9 345 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 RBPJLQ9UBG7 517 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 MGAMO43451 1857 aa8.19□□□□□ -1.1
LIMD1-204ENST00000474665 GOLGA8HP0CJ92 632 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 BMP3P12645 472 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 DSG3P32926 999 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 SLC16A2P36021 539 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 MRE11P49959 708 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 EVCP57679 992 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 HERVK_113P62684 666 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 WTAPQ15007 396 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 Q3C1V9 767 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 IFIT1BQ5T764 474 aaKnown RBP8.18□□□□□ -1.1
LIMD1-204ENST00000474665 BLOC1S2Q6QNY1 142 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 BTNL9Q6UXG8 535 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 Q6ZUG5 572 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 RAB11FIP4Q86YS3 637 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 DCAF4Q8WV16 495 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 ATG4CQ96DT6 458 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 TMEM87BQ96K49 555 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 NECAB3Q96P71 396 aaPredicted RBP8.18□□□□□ -1.1
LIMD1-204ENST00000474665 ASB2Q96Q27 587 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 LARP6Q9BRS8 491 aaKnown RBP8.18□□□□□ -1.1
LIMD1-204ENST00000474665 EPHX3Q9H6B9 360 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 C11orf49Q9H6J7 331 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
LIMD1-204ENST00000474665 BTBD7Q9P203 1132 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 MAD2L2Q9UI95 211 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
LIMD1-204ENST00000474665 PALM3A6NDB9 673 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 VWA5AO00534 786 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 RAD21O60216 631 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 PLA2G6O60733 806 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 FLOT1O75955 427 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 HMGB1P09429 215 aaKnown RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 CAPN2P17655 700 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 RXRAP19793 462 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 PSMA5P28066 241 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 SLC1A4P43007 532 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 COG2Q14746 738 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 GRM4Q14833 912 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 APOA5Q6Q788 366 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 BRF1Q92994 677 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 PARK7Q99497 189 aaKnown RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 KAT14Q9H8E8 782 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 CYP46A1Q9Y6A2 500 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 ZNF536O15090 1300 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 FRMPD2Q68DX3 1309 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-204ENST00000474665 PLXNB2O15031 1838 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
LIMD1-204ENST00000474665 CYTH3O43739 400 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 EIF5BO60841 1220 aaKnown RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 CD2BP2O95400 341 aaKnown RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 FLT3LGP49771 235 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 SNAP25P60880 206 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 FUT2Q10981 343 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 TMEM132BQ14DG7 1078 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 SART3Q15020 963 aaKnown RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 SHHQ15465 462 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 SLF1Q9BQI6 1058 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 UBA5Q9GZZ9 404 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 PORCNQ9H237 461 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 SLC38A10Q9HBR0 1119 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 MORF4L1Q9UBU8 362 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 ZNF214Q9UL59 606 aaPredicted RBP8.16□□□□□ -1.1
LIMD1-204ENST00000474665 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 TPCN1Q9ULQ1 816 aa8.16□□□□□ -1.1
LIMD1-204ENST00000474665 NID2Q14112 1375 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms