RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ZNF792Q3KQV3 632 aa18.77■□□□□ 0.6
ITGB1-210ENST00000474568 ANO1Q5XXA6 986 aa18.77■□□□□ 0.6
ITGB1-210ENST00000474568 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
ITGB1-210ENST00000474568 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.6
ITGB1-210ENST00000474568 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
ITGB1-210ENST00000474568 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
ITGB1-210ENST00000474568 CYBAP13498 195 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 NT5C2P49902 561 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 IFIT1BQ5T764 474 aaKnown RBP18.76■□□□□ 0.59
ITGB1-210ENST00000474568 BTNL9Q6UXG8 535 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 CHST13Q8NET6 341 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 PAWRQ96IZ0 340 aaKnown RBP18.76■□□□□ 0.59
ITGB1-210ENST00000474568 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 ACAD9Q9H845 621 aa18.76■□□□□ 0.59
ITGB1-210ENST00000474568 TNRC18O15417 2968 aaPredicted RBP18.75■□□□□ 0.59
ITGB1-210ENST00000474568 ZNF236Q9UL36 1845 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 IFIT3O14879 490 aaKnown RBP18.75■□□□□ 0.59
ITGB1-210ENST00000474568 CDC45O75419 566 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 IGHA2P01877 340 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 SNHG28P0DPA3 235 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 LHX8Q68G74 356 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 UBE2Q1Q7Z7E8 422 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 NCOA7Q8NI08 942 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 RANBP17Q9H2T7 1088 aaKnown RBP18.75■□□□□ 0.59
ITGB1-210ENST00000474568 FBXO40Q9UH90 709 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
ITGB1-210ENST00000474568 OGDHLQ9ULD0 1010 aa18.75■□□□□ 0.59
ITGB1-210ENST00000474568 SLC27A2O14975 620 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 SEC23AQ15436 765 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 DPF3Q92784 378 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 SENP2Q9HC62 589 aa18.74■□□□□ 0.59
ITGB1-210ENST00000474568 MYCNP04198 464 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-210ENST00000474568 ICAM1P05362 532 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 CNTN2Q02246 1040 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 TKFCQ3LXA3 575 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
ITGB1-210ENST00000474568 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 NSMFQ6X4W1 530 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
ITGB1-210ENST00000474568 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
ITGB1-210ENST00000474568 DNAJC25-GNG10A0A024R161 153 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 ERICH2A1L162 156 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 POTEB2H3BUK9 544 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
ITGB1-210ENST00000474568 PARP1P09874 1014 aaKnown RBP18.72■□□□□ 0.59
ITGB1-210ENST00000474568 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-210ENST00000474568 ANTXR2P58335 489 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 NECAB2Q7Z6G3 386 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
ITGB1-210ENST00000474568 DIS3Q9Y2L1 958 aaKnown RBP18.72■□□□□ 0.59
ITGB1-210ENST00000474568 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 WTAPQ15007 396 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 TMEM67Q5HYA8 995 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 PRPF38BQ5VTL8 546 aaKnown RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 MB21D2Q8IYB1 491 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 ANKLE1Q8NAG6 615 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 FGD4Q96M96 766 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 HTATIP2Q9BUP3 242 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.59
ITGB1-210ENST00000474568 GPHNQ9NQX3 736 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 DDX49Q9Y6V7 483 aaKnown RBP18.71■□□□□ 0.59
ITGB1-210ENST00000474568 NFIBO00712 420 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 SEPT4O43236 478 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 SART3Q15020 963 aaKnown RBP18.7■□□□□ 0.58
ITGB1-210ENST00000474568 CDC37Q16543 378 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-210ENST00000474568 USH1GQ495M9 461 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 PDE4DIPQ5VU43 2346 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
ITGB1-210ENST00000474568 ADGRF4Q8IZF3 695 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-210ENST00000474568 PURBQ96QR8 312 aaKnown RBP18.7■□□□□ 0.58
ITGB1-210ENST00000474568 CNPY2Q9Y2B0 182 aa18.7■□□□□ 0.58
ITGB1-210ENST00000474568 PRC1O43663 620 aa18.69■□□□□ 0.58
ITGB1-210ENST00000474568 MSCO60682 206 aa18.69■□□□□ 0.58
ITGB1-210ENST00000474568 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
ITGB1-210ENST00000474568 CAPN2P17655 700 aa18.69■□□□□ 0.58
ITGB1-210ENST00000474568 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
ITGB1-210ENST00000474568 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
ITGB1-210ENST00000474568 PTPDC1A2A3K4 754 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 ZNF865P0CJ78 1059 aaPredicted RBP18.68■□□□□ 0.58
ITGB1-210ENST00000474568 BAATQ14032 418 aaPredicted RBP18.68■□□□□ 0.58
ITGB1-210ENST00000474568 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 FAM133AQ8N9E0 248 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.68■□□□□ 0.58
ITGB1-210ENST00000474568 CYP39A1Q9NYL5 469 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 PFASO15067 1338 aa18.68■□□□□ 0.58
ITGB1-210ENST00000474568 KLRF2D3W0D1 207 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 CALML3P27482 149 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 QRICH1Q2TAL8 776 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 SLC30A10Q6XR72 485 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 ZNF467Q7Z7K2 595 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms