RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ATP11BQ9Y2G3 1177 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 LRIT3Q3SXY7 679 aa24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 RRP12Q5JTH9 1297 aaKnown RBP24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 C1orf53Q5VUE5 145 aa24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 ZNF589Q86UQ0 364 aaPredicted RBP24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 DCAF4Q8WV16 495 aa24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 HOMER2Q9NSB8 354 aa24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 TCP11L1Q9NUJ3 509 aa24.04■■□□□ 1.44
PDLIM4-206ENST00000474421 SNAI1O95863 264 aaPredicted RBP24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 SDSP20132 328 aa24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 MDM2Q00987 491 aaPredicted RBP24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 GPR153Q6NV75 609 aa24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 KCTD1Q719H9 257 aa24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 ABHD16BQ9H3Z7 469 aa24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 ZHX1Q9UKY1 873 aaPredicted RBP24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 TACC3Q9Y6A5 838 aa24.03■■□□□ 1.44
PDLIM4-206ENST00000474421 HIP1O00291 1037 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 SOX1O00570 391 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 PGK1P00558 417 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 TOP1P11387 765 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 CCDC96Q2M329 555 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 MFSD6Q6ZSS7 791 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 TSEN34Q9BSV6 310 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 RNF41Q9H4P4 317 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 RNF146Q9NTX7 359 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 PRR12Q9ULL5 1215 aa24.02■■□□□ 1.44
PDLIM4-206ENST00000474421 MCM3APO60318 1980 aa24.02■■□□□ 1.43
PDLIM4-206ENST00000474421 POTEB2H3BUK9 544 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 NT5C2P49902 561 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 ACVR2BQ13705 512 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 AKNAD1Q5T1N1 836 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 FERMT2Q96AC1 680 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 CHMP4CQ96CF2 233 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 AGBL1Q96MI9 1066 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 ZNF536O15090 1300 aa24.01■■□□□ 1.43
PDLIM4-206ENST00000474421 DUSP11O75319 330 aaKnown RBP24■■□□□ 1.43
PDLIM4-206ENST00000474421 HAND2P61296 217 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 TRIM60Q495X7 471 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 LRCH3Q96II8 777 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 TRERF1Q96PN7 1200 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 DIAPH3Q9NSV4 1193 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 MTMR7Q9Y216 660 aa24■■□□□ 1.43
PDLIM4-206ENST00000474421 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 ALAS1P13196 640 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 CCDC174Q6PII3 467 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 ARMCX2Q7L311 632 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 FAM133AQ8N9E0 248 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 FGD4Q96M96 766 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 TTC14Q96N46 770 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 TMEM47Q9BQJ4 181 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 SPC25Q9HBM1 224 aa23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 A1CFQ9NQ94 594 aaKnown RBP23.99■■□□□ 1.43
PDLIM4-206ENST00000474421 MOXD2PA6NHM9 499 aa23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 ASB14A6NK59 587 aa23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 BTNL9Q6UXG8 535 aa23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 NUP133Q8WUM0 1156 aa23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 PRDM5Q9NQX1 630 aaPredicted RBP23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 SYNRGQ9UMZ2 1314 aa23.98■■□□□ 1.43
PDLIM4-206ENST00000474421 A0A1W2PQ45 241 aaPredicted RBP23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 A0A1W2PQY0 241 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 ZNF213O14771 459 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 ICAM1P05362 532 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 LTBP2Q14767 1821 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 CWC27Q6UX04 472 aaKnown RBP23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 CCDC144CPQ8IYA2 1237 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 ESR2Q92731 530 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 LENG1Q96BZ8 264 aaPredicted RBP23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 RANBP17Q9H2T7 1088 aaKnown RBP23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 PNMA2Q9UL42 364 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 CCPG1Q9ULG6 757 aa23.97■■□□□ 1.43
PDLIM4-206ENST00000474421 CNTN2Q02246 1040 aa23.96■■□□□ 1.43
PDLIM4-206ENST00000474421 CCDC144BQ3MJ40 725 aa23.96■■□□□ 1.43
PDLIM4-206ENST00000474421 SYDE2Q5VT97 1194 aa23.96■■□□□ 1.43
PDLIM4-206ENST00000474421 PCSK9Q8NBP7 692 aaKnown RBP23.96■■□□□ 1.43
PDLIM4-206ENST00000474421 PDLIM7Q9NR12 457 aa23.96■■□□□ 1.43
PDLIM4-206ENST00000474421 CST5P28325 142 aaPredicted RBP23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 ACLYP53396 1101 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 SNAP25P60880 206 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 TLE2Q04725 743 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 CCDC178Q5BJE1 867 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 RASGRP2Q7LDG7 609 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 TBC1D10CQ8IV04 446 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 STARD7Q9NQZ5 370 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 LAMA4Q16363 1823 aa23.95■■□□□ 1.42
PDLIM4-206ENST00000474421 PDHBP11177 359 aa23.94■■□□□ 1.42
PDLIM4-206ENST00000474421 KCNA10Q16322 511 aa23.94■■□□□ 1.42
PDLIM4-206ENST00000474421 UPF3AQ9H1J1 476 aaKnown RBP23.94■■□□□ 1.42
PDLIM4-206ENST00000474421 CYP39A1Q9NYL5 469 aa23.94■■□□□ 1.42
PDLIM4-206ENST00000474421 SOWAHBA6NEL2 793 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 CLTBP09497 229 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 C6orf222P0C671 652 aaPredicted RBP23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 SLC16A2P36021 539 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 GJA9P57773 515 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 CCSAPQ6IQ19 270 aaPredicted RBP23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 TTBK2Q6IQ55 1244 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 IQCA1Q86XH1 822 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 DGKHQ86XP1 1220 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms