RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
VANGL1-205ENST00000474344 NID2Q14112 1375 aa12.16□□□□□ -0.46
VANGL1-205ENST00000474344 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 TNPO2O14787 897 aaKnown RBP12.15□□□□□ -0.46
VANGL1-205ENST00000474344 FMNL1O95466 1100 aaPredicted RBP12.15□□□□□ -0.46
VANGL1-205ENST00000474344 ICAM1P05362 532 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 PTPREP23469 700 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 PRMT2P55345 433 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 SNAP25P60880 206 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 FUT2Q10981 343 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 IRF5Q13568 498 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 GRB14Q14449 540 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
VANGL1-205ENST00000474344 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 ABRAQ8N0Z2 381 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 FANCBQ8NB91 859 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 BRF1Q92994 677 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 MROH8Q9H579 483 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
VANGL1-205ENST00000474344 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 STRNO43815 780 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
VANGL1-205ENST00000474344 HOXC6P09630 235 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 CALM1P0DP23 149 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 CALM2P0DP24 149 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 CALM3P0DP25 149 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 RXRAP19793 462 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 HOXD10P28358 340 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 COPB2P35606 906 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 FLT3LGP49771 235 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 PRKCZQ05513 592 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
VANGL1-205ENST00000474344 PLS1Q14651 629 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
VANGL1-205ENST00000474344 FBXO46Q6PJ61 603 aaPredicted RBP12.14□□□□□ -0.47
VANGL1-205ENST00000474344 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 CPXCR1Q8N123 301 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 SRBD1Q8N5C6 995 aaKnown RBP12.14□□□□□ -0.47
VANGL1-205ENST00000474344 COA7Q96BR5 231 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 SPZ1Q9BXG8 430 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 MCOLN1Q9GZU1 580 aa12.14□□□□□ -0.47
VANGL1-205ENST00000474344 DNAJC25-GNG10A0A024R161 153 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 ZBTB43O43298 467 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
VANGL1-205ENST00000474344 COBLO75128 1261 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 XRCC5P13010 732 aaKnown RBP12.13□□□□□ -0.47
VANGL1-205ENST00000474344 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
VANGL1-205ENST00000474344 CDC27P30260 824 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 KIF5BP33176 963 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 CHST13Q8NET6 341 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 ISY1Q9ULR0 285 aaKnown RBP12.13□□□□□ -0.47
VANGL1-205ENST00000474344 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 TNRC18O15417 2968 aaPredicted RBP12.13□□□□□ -0.47
VANGL1-205ENST00000474344 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
VANGL1-205ENST00000474344 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
VANGL1-205ENST00000474344 GNAQP50148 359 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 MAP2K5Q13163 448 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 PPP2R5BQ15173 497 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 NTRK3Q16288 839 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
VANGL1-205ENST00000474344 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
VANGL1-205ENST00000474344 CLEC4DQ8WXI8 215 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 ZNF274Q96GC6 653 aaPredicted RBP12.12□□□□□ -0.47
VANGL1-205ENST00000474344 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
VANGL1-205ENST00000474344 LRRC37A2A6NM11 1700 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 OPLAHO14841 1288 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 ZBTB5O15062 677 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 ADORA2AP29274 412 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
VANGL1-205ENST00000474344 RTN1Q16799 776 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 NPLOC4Q8TAT6 608 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 FGD4Q96M96 766 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 PIGSQ96S52 555 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
VANGL1-205ENST00000474344 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms