RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
CKS1B-206ENST00000474215 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
CKS1B-206ENST00000474215 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
CKS1B-206ENST00000474215 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
CKS1B-206ENST00000474215 SGSM2O43147 1006 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 SNHG28P0DPA3 235 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 PDHBP11177 359 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 PTH1RQ03431 593 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
CKS1B-206ENST00000474215 ARRDC4Q8NCT1 418 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
CKS1B-206ENST00000474215 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
CKS1B-206ENST00000474215 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
CKS1B-206ENST00000474215 ALAS1P13196 640 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
CKS1B-206ENST00000474215 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
CKS1B-206ENST00000474215 PNMA1Q8ND90 353 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
CKS1B-206ENST00000474215 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 RNF146Q9NTX7 359 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 PFASO15067 1338 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
CKS1B-206ENST00000474215 DNM1LO00429 736 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
CKS1B-206ENST00000474215 ICAM1P05362 532 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 CYP21A2P08686 494 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 ZNF865P0CJ78 1059 aaPredicted RBP13.12□□□□□ -0.31
CKS1B-206ENST00000474215 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
CKS1B-206ENST00000474215 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
CKS1B-206ENST00000474215 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
CKS1B-206ENST00000474215 TNKSO95271 1327 aa13.12□□□□□ -0.31
CKS1B-206ENST00000474215 ZNFX1Q9P2E3 1918 aaKnown RBP13.11□□□□□ -0.31
CKS1B-206ENST00000474215 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 RARBP10826 455 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 TRDNQ13061 729 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
CKS1B-206ENST00000474215 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
CKS1B-206ENST00000474215 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 FGD4Q96M96 766 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
CKS1B-206ENST00000474215 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
CKS1B-206ENST00000474215 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
CKS1B-206ENST00000474215 AKR1A1P14550 325 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 LRRC26Q2I0M4 334 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
CKS1B-206ENST00000474215 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 C7orf61Q8IZ16 206 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.1□□□□□ -0.31
CKS1B-206ENST00000474215 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
CKS1B-206ENST00000474215 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 SOWAHBA6NEL2 793 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 E7EWF7 191 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 LRRC41Q15345 812 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 SEC23AQ15436 765 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 ASPRV1Q53RT3 343 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 CCDC136Q96JN2 1154 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 ZHX1Q9UKY1 873 aaPredicted RBP13.09□□□□□ -0.31
CKS1B-206ENST00000474215 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
CKS1B-206ENST00000474215 ASB14A6NK59 587 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 PGK1P00558 417 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 ADCYAP1R1P41586 468 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
CKS1B-206ENST00000474215 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
CKS1B-206ENST00000474215 RNF180Q86T96 592 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 NCOA7Q8NI08 942 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
CKS1B-206ENST00000474215 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
CKS1B-206ENST00000474215 NFIBO00712 420 aa13.07□□□□□ -0.32
CKS1B-206ENST00000474215 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms