RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
RAB3GAP2-204ENST00000474178 LCTP09848 1927 aa12.07□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TANC1Q9C0D5 1861 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 GNAI2P04899 355 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 MRE11P49959 708 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 NKX3-2P78367 333 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 AGBL1Q96MI9 1066 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TRPV6Q9H1D0 765 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ARHGEF10LQ9HCE6 1279 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 COG5Q9UP83 839 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
RAB3GAP2-204ENST00000474178 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 MAGEB6P1A0A0J9YX57 407 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 B4GALT4O60513 344 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 LPXNO60711 386 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 LCORLQ8N3X6 602 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SNX27Q96L92 541 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ZBBXA8MT70 800 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 BCAR3O75815 825 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TAP1Q03518 808 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SLFNL1Q499Z3 407 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ARHGAP45Q92619 1136 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 HLA-CQ95604 372 aa12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 DDX49Q9Y6V7 483 aaKnown RBP12.04□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TCRBV5S4A2TA0A5A2 114 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ANP32CO43423 234 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 PRKAB2O43741 272 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TRIM27P14373 513 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 PDE6AP16499 860 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 COPB2P35606 906 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 CDK8P49336 464 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 PSMC6P62333 389 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 GRB10Q13322 594 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 TMEM63BQ5T3F8 832 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 CRNKL1Q9BZJ0 848 aaKnown RBP12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
RAB3GAP2-204ENST00000474178 MYH7P12883 1935 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 PRR33A8MZF0 331 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 ZNF532Q9HCE3 1301 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SIP14410 1827 aa12.02□□□□□ -0.49
RAB3GAP2-204ENST00000474178 TRIP12Q14669 1992 aaPredicted RBP12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CNTN2Q02246 1040 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 NHLH1Q02575 133 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 PLCD3Q8N3E9 789 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SLF1Q9BQI6 1058 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 ARMT1Q9H993 441 aa12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
RAB3GAP2-204ENST00000474178 ATP2A1O14983 1001 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 RAD21O60216 631 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CHGBP05060 677 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CYP2C9P11712 490 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SMPD1P17405 629 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 TNFAIP2Q03169 654 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 C12orf60Q5U649 245 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 TMED8Q6PL24 325 aaPredicted RBP12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 TLK2Q86UE8 772 aa12□□□□□ -0.49
RAB3GAP2-204ENST00000474178 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms