RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 FBXO40Q9UH90 709 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 NRBP1Q9UHY1 535 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 CNPY2Q9Y2B0 182 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 COL11A1P12107 1806 aaPredicted RBP18.39■□□□□ 0.53
CLIC3-201ENST00000473911 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 RCSD1Q6JBY9 416 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 MFSD6Q6ZSS7 791 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 CHST13Q8NET6 341 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 FAM161BQ96MY7 647 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 VCANP13611 3396 aa18.38■□□□□ 0.53
CLIC3-201ENST00000473911 ZNF213O14771 459 aa18.37■□□□□ 0.53
CLIC3-201ENST00000473911 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
CLIC3-201ENST00000473911 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
CLIC3-201ENST00000473911 DCAF4Q8WV16 495 aa18.37■□□□□ 0.53
CLIC3-201ENST00000473911 RNF41Q9H4P4 317 aaPredicted RBP18.37■□□□□ 0.53
CLIC3-201ENST00000473911 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
CLIC3-201ENST00000473911 CDH23Q9H251 3354 aa18.37■□□□□ 0.53
CLIC3-201ENST00000473911 PLA2G6O60733 806 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 RARBP10826 455 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
CLIC3-201ENST00000473911 NOVP48745 357 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 CCDC174Q6PII3 467 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 SLC39A5Q6ZMH5 540 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 RASGRP2Q7LDG7 609 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
CLIC3-201ENST00000473911 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
CLIC3-201ENST00000473911 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 TAL1P17542 331 aaPredicted RBP18.35■□□□□ 0.53
CLIC3-201ENST00000473911 SNAP25P60880 206 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 TRIM60Q495X7 471 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 FERMT2Q96AC1 680 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 AGBL1Q96MI9 1066 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 PRR12Q9ULL5 1215 aa18.35■□□□□ 0.53
CLIC3-201ENST00000473911 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 ALAS1P13196 640 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 AKR1A1P14550 325 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 ADCYAP1R1P41586 468 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 LRRC41Q15345 812 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 SHHQ15465 462 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 TKFCQ3LXA3 575 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.34■□□□□ 0.53
CLIC3-201ENST00000473911 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
CLIC3-201ENST00000473911 ESR2Q92731 530 aa18.34■□□□□ 0.53
CLIC3-201ENST00000473911 LBHD1Q9BQE6 289 aaPredicted RBP18.34■□□□□ 0.53
CLIC3-201ENST00000473911 ZHX1Q9UKY1 873 aaPredicted RBP18.34■□□□□ 0.53
CLIC3-201ENST00000473911 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
CLIC3-201ENST00000473911 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.53
CLIC3-201ENST00000473911 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 ZNF865P0CJ78 1059 aaPredicted RBP18.33■□□□□ 0.52
CLIC3-201ENST00000473911 ITGB8P26012 769 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 PDE4AP27815 886 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 RNF180Q86T96 592 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 BADQ92934 168 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.52
CLIC3-201ENST00000473911 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
CLIC3-201ENST00000473911 ZNF536O15090 1300 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 NEDD4P46934 1319 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 PGK1P00558 417 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 SLC16A2P36021 539 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 SNX17Q15036 470 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 MAMDC4Q6UXC1 1216 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
CLIC3-201ENST00000473911 TTC14Q96N46 770 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 PRDM5Q9NQX1 630 aaPredicted RBP18.32■□□□□ 0.52
CLIC3-201ENST00000473911 PDLIM7Q9NR12 457 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 FAM184BQ9ULE4 1060 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 PLXNA1Q9UIW2 1896 aa18.32■□□□□ 0.52
CLIC3-201ENST00000473911 SNAI1O95863 264 aaPredicted RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 GSPT1P15170 499 aaKnown RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 FAM109BQ6ICB4 259 aaPredicted RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
CLIC3-201ENST00000473911 A1CFQ9NQ94 594 aaKnown RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
CLIC3-201ENST00000473911 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
CLIC3-201ENST00000473911 KDM4AO75164 1064 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 PDHBP11177 359 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 NT5C2P49902 561 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 CNTN2Q02246 1040 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 ACVR2BQ13705 512 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 ARMCX2Q7L311 632 aa18.3■□□□□ 0.52
CLIC3-201ENST00000473911 IQCA1Q86XH1 822 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms