RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NBPF9Q3BBW0 867 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 RETREG2Q8NC44 543 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 ERVK13-1Q9NX77 482 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 IMPACTQ9P2X3 320 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
CCDC39-203ENST00000473854 PRAMEF1O95521 474 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 FBLN1P23142 703 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 BMP8BP34820 402 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 SARSP49591 514 aaKnown RBP4.24□□□□□ -1.73
CCDC39-203ENST00000473854 MAP3K11Q16584 847 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 ZPBP2Q6X784 338 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 TTLL7Q6ZT98 887 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 FAM124AQ86V42 546 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 ZFPM1Q8IX07 1006 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 ADGRG2Q8IZP9 1017 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 ZNF526Q8TF50 670 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-203ENST00000473854 KIF2CQ99661 725 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 CDADC1Q9BWV3 514 aa4.24□□□□□ -1.73
CCDC39-203ENST00000473854 CHURC1-FNTBB4DL54 471 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 ZNF205O95201 554 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 HTR3BO95264 441 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 GNA15P30679 374 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 KIR3DS1Q14943 382 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 HLA-DQA1Q5Y7H0 255 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 BORAQ6PGQ7 559 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 GLB1LQ6UWU2 654 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 TMC3Q7Z5M5 1100 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 B3GNT8Q7Z7M8 397 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 LGI4Q8N135 537 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 SH3RF3Q8TEJ3 882 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-203ENST00000473854 NOC4LQ9BVI4 516 aaKnown RBP4.23□□□□□ -1.73
CCDC39-203ENST00000473854 PRDM14Q9GZV8 571 aa4.23□□□□□ -1.73
CCDC39-203ENST00000473854 DBHP09172 617 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 CORO7P57737 925 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 RBM10P98175 930 aaKnown RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 PURAQ00577 322 aaKnown RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 DLX2Q07687 328 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 TBC1D10BQ4KMP7 808 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 NBPF12Q5TAG4 269 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 ZNF761Q86XN6 746 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 JAMLQ86YT9 394 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 GATAD2BQ8WXI9 593 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 CHST7Q9NS84 486 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 PRR13Q9NZ81 148 aa4.22□□□□□ -1.73
CCDC39-203ENST00000473854 DBR1Q9UK59 544 aaKnown RBP4.22□□□□□ -1.73
CCDC39-203ENST00000473854 ATF2P15336 505 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 RAG1P15918 1043 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 CYP2R1Q6VVX0 501 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 Q8N1X5 172 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 NAT16Q8N8M0 369 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 ASB16Q96NS5 453 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 JMJD8Q96S16 334 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 PCED1AQ9H1Q7 454 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 VPS11Q9H270 941 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 ANTXR1Q9H6X2 564 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 PDLIM7Q9NR12 457 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 WWC3Q9ULE0 1092 aa4.21□□□□□ -1.74
CCDC39-203ENST00000473854 FAM221AA4D161 298 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 CCNFP41002 786 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 LMNB2Q03252 620 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 MVKQ03426 396 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 SURF1Q15526 300 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 BICRALQ6AI39 1079 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 SPRED1Q7Z699 444 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 PHC3Q8NDX5 983 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 ALG3Q92685 438 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 PCDH18Q9HCL0 1135 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 GNEQ9Y223 722 aaKnown RBP4.2□□□□□ -1.74
CCDC39-203ENST00000473854 ZNF536O15090 1300 aa4.2□□□□□ -1.74
CCDC39-203ENST00000473854 SMARCA5O60264 1052 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-203ENST00000473854 UBOX5O94941 541 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 LDHBP07195 334 aaKnown RBP4.19□□□□□ -1.74
CCDC39-203ENST00000473854 ASGR2P07307 311 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 ST13P50502 369 aaKnown RBP4.19□□□□□ -1.74
CCDC39-203ENST00000473854 FAM26FQ5R3K3 315 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 CABP7Q86V35 215 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 RGS22Q8NE09 1264 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 ADAMTS17Q8TE56 1095 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 CPA5Q8WXQ8 436 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 ZNF747Q9BV97 191 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 TLR6Q9Y2C9 796 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 AK5Q9Y6K8 562 aa4.19□□□□□ -1.74
CCDC39-203ENST00000473854 F8W031 263 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-203ENST00000473854 CLEC3AO75596 197 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 GSNP06396 782 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 VAV1P15498 845 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 PRR5P85299 388 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 TRIM26Q12899 539 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-203ENST00000473854 SNW1Q13573 536 aaKnown RBP4.18□□□□□ -1.74
CCDC39-203ENST00000473854 MPP2Q14168 576 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 BNC2Q6ZN30 1099 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-203ENST00000473854 PLEKHH3Q7Z736 793 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 TSPAN17Q96FV3 270 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 AP5S1Q9NUS5 200 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 GMIPQ9P107 970 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 PCDHB12Q9Y5F1 795 aa4.18□□□□□ -1.74
CCDC39-203ENST00000473854 TGFB2P61812 414 aa4.17□□□□□ -1.74
CCDC39-203ENST00000473854 CAMK2GQ13555 558 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms