RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DISC1Q9NRI5 854 aa23.71■■□□□ 1.39
COL18A1-207ENST00000473212 PODXL2Q9NZ53 605 aa23.71■■□□□ 1.39
COL18A1-207ENST00000473212 RREB1Q92766 1687 aa23.7■■□□□ 1.39
COL18A1-207ENST00000473212 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
COL18A1-207ENST00000473212 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
COL18A1-207ENST00000473212 H7C1D1 291 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 GOLGA5Q8TBA6 731 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 GBP3Q9H0R5 595 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 HDAC6Q9UBN7 1215 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 OR8K1Q8NGG5 319 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 SH3RF3Q8TEJ3 882 aaPredicted RBP23.7■■□□□ 1.38
COL18A1-207ENST00000473212 ATP8A2Q9NTI2 1148 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 RNF216Q9NWF9 866 aaPredicted RBP23.7■■□□□ 1.38
COL18A1-207ENST00000473212 KIAA1551Q9HCM1 1747 aa23.7■■□□□ 1.38
COL18A1-207ENST00000473212 PCP11498 1178 aaKnown RBP23.69■■□□□ 1.38
COL18A1-207ENST00000473212 LONP1P36776 959 aaKnown RBP23.69■■□□□ 1.38
COL18A1-207ENST00000473212 KLK7P49862 253 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 CLEC4GQ6UXB4 293 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 HEATR3Q7Z4Q2 680 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 MSL3Q8N5Y2 521 aaKnown RBP23.69■■□□□ 1.38
COL18A1-207ENST00000473212 MB21D1Q8N884 522 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 CCDC102AQ96A19 550 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 PCDHA6Q9UN73 950 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 PCDHA4Q9UN74 947 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 PCDHA8Q9Y5H6 950 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 ADSSL1Q8N142 457 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 ARPP21Q9UBL0 812 aaPredicted RBP23.69■■□□□ 1.38
COL18A1-207ENST00000473212 MAD2L2Q9UI95 211 aa23.69■■□□□ 1.38
COL18A1-207ENST00000473212 LUC7L2Q9Y383 392 aaKnown RBP23.69■■□□□ 1.38
COL18A1-207ENST00000473212 KLRC4O43908 158 aa23.68■■□□□ 1.38
COL18A1-207ENST00000473212 ACTN2P35609 894 aa23.68■■□□□ 1.38
COL18A1-207ENST00000473212 ARL6IP4Q66PJ3 421 aaKnown RBP23.68■■□□□ 1.38
COL18A1-207ENST00000473212 TRAPPC11Q7Z392 1133 aa23.68■■□□□ 1.38
COL18A1-207ENST00000473212 DZIP1Q86YF9 867 aaKnown RBP23.68■■□□□ 1.38
COL18A1-207ENST00000473212 LRRIQ3A6PVS8 624 aaPredicted RBP23.68■■□□□ 1.38
COL18A1-207ENST00000473212 M0R2N6 131 aa23.68■■□□□ 1.38
COL18A1-207ENST00000473212 PHACTR2O75167 634 aa23.68■■□□□ 1.38
COL18A1-207ENST00000473212 SAP30BPQ9UHR5 308 aaKnown RBP23.68■■□□□ 1.38
COL18A1-207ENST00000473212 LAMB1P07942 1786 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 GOLGB1Q14789 3259 aaKnown RBP23.67■■□□□ 1.38
COL18A1-207ENST00000473212 LGALS16A8MUM7 142 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 GPIHBP1Q8IV16 184 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 CCDC194A0A1B0GVG4 234 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 HERVK_113P62684 666 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 WDR59Q6PJI9 974 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 CCDC148Q8NFR7 591 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 HPS3Q969F9 1004 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 DNAJC7Q99615 494 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 HAUS4Q9H6D7 363 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 CWC15Q9P013 229 aaKnown RBP23.67■■□□□ 1.38
COL18A1-207ENST00000473212 FEZ2Q9UHY8 353 aaPredicted RBP23.67■■□□□ 1.38
COL18A1-207ENST00000473212 STX8Q9UNK0 236 aa23.67■■□□□ 1.38
COL18A1-207ENST00000473212 PSMD14O00487 310 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 SRGAP2O75044 1071 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 ATP1A1P05023 1023 aaKnown RBP23.66■■□□□ 1.38
COL18A1-207ENST00000473212 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 WDR93Q6P2C0 686 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 DTHD1Q6ZMT9 781 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 MKRN1Q9UHC7 482 aaKnown RBP23.66■■□□□ 1.38
COL18A1-207ENST00000473212 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
COL18A1-207ENST00000473212 TUBBP07437 444 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 KIF5BP33176 963 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 SBK1Q52WX2 424 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 HSP90B2PQ58FF3 399 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 CCDC122Q5T0U0 273 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 NBPF5PQ86XG9 351 aaPredicted RBP23.66■■□□□ 1.38
COL18A1-207ENST00000473212 ZNF507Q8TCN5 953 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 AGPAT5Q9NUQ2 364 aa23.66■■□□□ 1.38
COL18A1-207ENST00000473212 B4DLN1 442 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 TSR1Q2NL82 804 aaKnown RBP23.65■■□□□ 1.38
COL18A1-207ENST00000473212 TGFBRAP1Q8WUH2 860 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 BBXQ8WY36 941 aaPredicted RBP23.65■■□□□ 1.38
COL18A1-207ENST00000473212 TRIM47Q96LD4 638 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 MMS19Q96T76 1030 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 LCMT1Q9UIC8 334 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 CAPN11Q9UMQ6 739 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 LEKR1Q6ZMV7 388 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 NLRP3Q96P20 1036 aa23.65■■□□□ 1.38
COL18A1-207ENST00000473212 CALML3P27482 149 aa23.64■■□□□ 1.38
COL18A1-207ENST00000473212 FAM71BQ8TC56 605 aa23.64■■□□□ 1.38
COL18A1-207ENST00000473212 MKNK2Q9HBH9 465 aa23.64■■□□□ 1.38
COL18A1-207ENST00000473212 A0A1W2PQC6 194 aa23.64■■□□□ 1.37
COL18A1-207ENST00000473212 EEF1GP26641 437 aaKnown RBP23.64■■□□□ 1.37
COL18A1-207ENST00000473212 UBA7P41226 1012 aa23.64■■□□□ 1.37
COL18A1-207ENST00000473212 USP14P54578 494 aa23.64■■□□□ 1.37
COL18A1-207ENST00000473212 CAPZA3Q96KX2 299 aa23.64■■□□□ 1.37
COL18A1-207ENST00000473212 SAR1BQ9Y6B6 198 aa23.64■■□□□ 1.37
COL18A1-207ENST00000473212 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 PDS5AQ29RF7 1337 aaKnown RBP23.63■■□□□ 1.37
COL18A1-207ENST00000473212 RCCD1A6NED2 376 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 STXBP3O00186 592 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 MAPKAPK5Q8IW41 473 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 FCER1AP12319 257 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 GRM4Q14833 912 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 ZFP91Q96JP5 570 aaPredicted RBP23.63■■□□□ 1.37
COL18A1-207ENST00000473212 DUSP9Q99956 384 aaKnown RBP23.63■■□□□ 1.37
COL18A1-207ENST00000473212 THAP9Q9H5L6 903 aa23.63■■□□□ 1.37
COL18A1-207ENST00000473212 MAGEC2Q9UBF1 373 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms