RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 INTS13Q9NVM9 706 aa12.44□□□□□ -0.42
NMD3-206ENST00000472947 HOOK1Q9UJC3 728 aaKnown RBP12.44□□□□□ -0.42
NMD3-206ENST00000472947 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
NMD3-206ENST00000472947 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
NMD3-206ENST00000472947 BMP15O95972 392 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 KCNA3P22001 575 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 ARMCX5Q6P1M9 558 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 DTHD1Q6ZMT9 781 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 DAGLBQ8NCG7 672 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SPATA20Q8TB22 786 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 C6orf50Q9HD87 102 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SMCHD1A6NHR9 2005 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 PSMD14O00487 310 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 ZBTB7AO95365 584 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SNHG28P0DPA3 235 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 SKILP12757 684 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 RASSF8Q8NHQ8 419 aa12.43□□□□□ -0.42
NMD3-206ENST00000472947 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
NMD3-206ENST00000472947 TRMT1Q9NXH9 659 aaKnown RBP12.43□□□□□ -0.42
NMD3-206ENST00000472947 TDP2O95551 362 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 TPM3P06753 285 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 TECP42680 631 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 CCZ1BP86790 482 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 CCZ1P86791 482 aaPredicted RBP12.42□□□□□ -0.42
NMD3-206ENST00000472947 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
NMD3-206ENST00000472947 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 REXO1Q8N1G1 1221 aaKnown RBP12.42□□□□□ -0.42
NMD3-206ENST00000472947 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 SLC37A4O43826 429 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 TPM4P67936 248 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 DHX8Q14562 1220 aaKnown RBP12.42□□□□□ -0.42
NMD3-206ENST00000472947 ASPRV1Q53RT3 343 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 KANK3Q6NY19 840 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 IQUBQ8NA54 791 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 TRIM34Q9BYJ4 488 aa12.42□□□□□ -0.42
NMD3-206ENST00000472947 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
NMD3-206ENST00000472947 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
NMD3-206ENST00000472947 GH2P01242 217 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 STAT6P42226 847 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 TXKP42681 527 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 TNNI2P48788 182 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 NT5C2P49902 561 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
NMD3-206ENST00000472947 MLKLQ8NB16 471 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 GDAQ9Y2T3 454 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
NMD3-206ENST00000472947 GNA11P29992 359 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 USP17L6PQ6QN14 398 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 NEK8Q86SG6 692 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 CSRNP1Q96S65 589 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 CTNND2Q9UQB3 1225 aa12.41□□□□□ -0.42
NMD3-206ENST00000472947 NEMFO60524 1076 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
NMD3-206ENST00000472947 SLC1A4P43007 532 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 ADCY7P51828 1080 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
NMD3-206ENST00000472947 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 GALNT17Q6IS24 598 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
NMD3-206ENST00000472947 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 EHD4Q9H223 541 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
NMD3-206ENST00000472947 MORC2Q9Y6X9 1032 aaPredicted RBP12.4□□□□□ -0.42
NMD3-206ENST00000472947 GREB1LQ9C091 1923 aaPredicted RBP12.4□□□□□ -0.42
NMD3-206ENST00000472947 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 A0A1W2PRG0 241 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 UQCRHP07919 91 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 OR52Z1P0C646 297 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 UBA7P41226 1012 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 ICA1Q05084 483 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.43
NMD3-206ENST00000472947 MIGA2Q7L4E1 593 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 CCDC12Q8WUD4 166 aaPredicted RBP12.4□□□□□ -0.43
NMD3-206ENST00000472947 VEZTQ9HBM0 779 aa12.4□□□□□ -0.43
NMD3-206ENST00000472947 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
NMD3-206ENST00000472947 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms