RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 KIF2AO00139 706 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-205ENST00000472806 CCP110O43303 1012 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 PRDM1O75626 825 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TUBB4AP04350 444 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TSPY3P0CV98 308 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TSPY8P0CW00 308 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 GYS1P13807 737 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TXLNAP40222 546 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 GPSM2P81274 684 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TFAP4Q01664 338 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 POSTNQ15063 836 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 PKN1Q16512 942 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 FLAD1Q8NFF5 587 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC12Q8WUD4 166 aaPredicted RBP8.7□□□□□ -1.02
CCDC171-205ENST00000472806 SMARCE1Q969G3 411 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 CD209Q9NNX6 404 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 VPS54Q9P1Q0 977 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 TAF1P21675 1872 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 MYH6P13533 1939 aa8.7□□□□□ -1.02
CCDC171-205ENST00000472806 UBR3Q6ZT12 1888 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 CYP2D7A0A087X1C5 515 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 UQCRHLA0A096LP55 91 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 GPR75-ASB3A0A0A6YYF3 556 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 PLEKHA8P1O95397 391 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 UQCRHP07919 91 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 JUNDP17535 347 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 SMARCA1P28370 1054 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 TOB1P50616 345 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 GRM4Q14833 912 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 FAM47AQ5JRC9 791 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 TTC38Q5R3I4 469 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 ARL6IP4Q66PJ3 421 aaKnown RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 KRT27Q7Z3Y8 459 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 LRRC8AQ8IWT6 810 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 SP8Q8IXZ3 490 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 TEX11Q8IYF3 940 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 CCDC112Q8NEF3 446 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 SH3RF3Q8TEJ3 882 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 CLIC6Q96NY7 704 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 COA1Q9GZY4 146 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 OSBPL5Q9H0X9 879 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 KCNF1Q9H3M0 494 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 QTRT2Q9H974 415 aaKnown RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 BAZ2AQ9UIF9 1905 aaKnown RBP8.69□□□□□ -1.02
CCDC171-205ENST00000472806 FAM205AQ6ZU69 1335 aa8.69□□□□□ -1.02
CCDC171-205ENST00000472806 NAV1Q8NEY1 1877 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 hCG_1984214I3L0E3 225 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 BIN1O00499 593 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 LAD1O00515 517 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 POLR2DO15514 142 aaKnown RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 ALDH1B1P30837 517 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 BTDP43251 543 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 KCNJ6P48051 423 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 USP46P62068 366 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 ATP2C1P98194 919 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 SEMA3FQ13275 785 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 NR5A1Q13285 461 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 FAM182BQ5T319 152 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 SRBD1Q8N5C6 995 aaKnown RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 ZNF713Q8N859 430 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 DAGLBQ8NCG7 672 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 MYRIPQ8NFW9 859 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 RTFDC1Q9BY42 306 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-205ENST00000472806 KCND1Q9NSA2 647 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 PYCARDQ9ULZ3 195 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 PAXBP1Q9Y5B6 917 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 PCDHB6Q9Y5E3 794 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 MYH2Q9UKX2 1941 aa8.68□□□□□ -1.02
CCDC171-205ENST00000472806 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 GAKO14976 1311 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 SIAH2O43255 324 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 RRP9O43818 475 aaKnown RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 SERPINC1P01008 464 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 SLFN14P0C7P3 912 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 CYP2D6P10635 497 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 NDUFV2P19404 249 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 ATP2B1P20020 1258 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 SFPQP23246 707 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 PDE6BP35913 854 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 LONP1P36776 959 aaKnown RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 UBASH3AP57075 661 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 FANCCQ00597 558 aa8.67□□□□□ -1.02
CCDC171-205ENST00000472806 ORC2Q13416 577 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-205ENST00000472806 PNOCQ13519 176 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms