RNA–Protein interactions for RNA: ENST00000472622.5

TMEM254-210, Transcript of transmembrane protein 254, humanhuman

TSL 2

Gene TMEM254, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-210ENST00000472622 KIAA0355O15063 1070 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 ORC4O43929 436 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
TMEM254-210ENST00000472622 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
TMEM254-210ENST00000472622 KLHDC9Q8NEP7 349 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 BADQ92934 168 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
TMEM254-210ENST00000472622 ISY1Q9ULR0 285 aaKnown RBP17.1■□□□□ 0.33
TMEM254-210ENST00000472622 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
TMEM254-210ENST00000472622 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 SHHQ15465 462 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 CCSAPQ6IQ19 270 aaPredicted RBP17.09■□□□□ 0.33
TMEM254-210ENST00000472622 STARD7Q9NQZ5 370 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 ELP1O95163 1332 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 LTBP2Q14767 1821 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
TMEM254-210ENST00000472622 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
TMEM254-210ENST00000472622 MROH7Q68CQ1 1323 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 ASB14A6NK59 587 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 FOXP2O15409 715 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 FGRP09769 529 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 RAG1P15918 1043 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 MCCP23508 829 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 NOVP48745 357 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 PDE1AP54750 535 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
TMEM254-210ENST00000472622 KCNA10Q16322 511 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 FAM133AQ8N9E0 248 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 FGD4Q96M96 766 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 GLT1D1Q96MS3 346 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
TMEM254-210ENST00000472622 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 RNF146Q9NTX7 359 aa17.08■□□□□ 0.32
TMEM254-210ENST00000472622 ZNF536O15090 1300 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
TMEM254-210ENST00000472622 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
TMEM254-210ENST00000472622 GJA9P57773 515 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 NKX3-2P78367 333 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 LENG1Q96BZ8 264 aaPredicted RBP17.07■□□□□ 0.32
TMEM254-210ENST00000472622 HOMER2Q9NSB8 354 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 TMEM39AQ9NV64 488 aa17.07■□□□□ 0.32
TMEM254-210ENST00000472622 C6orf222P0C671 652 aaPredicted RBP17.06■□□□□ 0.32
TMEM254-210ENST00000472622 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
TMEM254-210ENST00000472622 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 C9orf50Q5SZB4 431 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 AGBL1Q96MI9 1066 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
TMEM254-210ENST00000472622 PNMA2Q9UL42 364 aa17.06■□□□□ 0.32
TMEM254-210ENST00000472622 NT5C2P49902 561 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 FPGSQ05932 587 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 SEZ6LQ9BYH1 1024 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 KATNBL1Q9H079 304 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 TCP11L1Q9NUJ3 509 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 PRR12Q9ULL5 1215 aa17.05■□□□□ 0.32
TMEM254-210ENST00000472622 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
TMEM254-210ENST00000472622 DLL1O00548 723 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 CABYRO75952 493 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 FGAP02671 866 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 ICAM1P05362 532 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 ASGR1P07306 291 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
TMEM254-210ENST00000472622 ALAS1P13196 640 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 CDK7P50613 346 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 MFAP1P55081 439 aaKnown RBP17.04■□□□□ 0.32
TMEM254-210ENST00000472622 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 BTNL9Q6UXG8 535 aa17.04■□□□□ 0.32
TMEM254-210ENST00000472622 TMEM265A0A087WTH1 108 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 NMT2O60551 498 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 TIMP1P01033 207 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 ITGB8P26012 769 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
TMEM254-210ENST00000472622 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 RNPC3Q96LT9 517 aaKnown RBP17.03■□□□□ 0.32
TMEM254-210ENST00000472622 TTC14Q96N46 770 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
TMEM254-210ENST00000472622 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms