RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 LBX2Q6XYB7 198 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 HOMER1Q86YM7 354 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 ZMYND12Q9H0C1 365 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 ZSCAN16Q9H4T2 348 aaPredicted RBP22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 GJB4Q9NTQ9 266 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 VPS54Q9P1Q0 977 aa22.4■■□□□ 1.18
CHMP2B-204ENST00000472024 TESPA1A2RU30 521 aaPredicted RBP22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 FLOT1O75955 427 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 CALML3P27482 149 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 KIF23Q02241 960 aaPredicted RBP22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 IKQ13123 557 aaPredicted RBP22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 COG2Q14746 738 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 TREML2Q5T2D2 321 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 OTUD7BQ6GQQ9 843 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 GPAT2Q6NUI2 795 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 RASAL3Q86YV0 1011 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 REPS2Q8NFH8 660 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 AMNQ9BXJ7 453 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 TANGO6Q9C0B7 1094 aa22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 FOXP1Q9H334 677 aaPredicted RBP22.39■■□□□ 1.17
CHMP2B-204ENST00000472024 ATP2A1O14983 1001 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 CETPP11597 493 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 OAZ1P54368 228 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 HEATR3Q7Z4Q2 680 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 GPKOWQ92917 476 aaPredicted RBP eCLIP22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 KIFC2Q96AC6 838 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 HOXC10Q9NYD6 342 aa22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 ISY1Q9ULR0 285 aaKnown RBP22.38■■□□□ 1.17
CHMP2B-204ENST00000472024 ZNF536O15090 1300 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 TMEM88BA6NKF7 163 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 M0R2N6 131 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 PABPC4Q13310 644 aaKnown RBP eCLIP22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 RGMBQ6NW40 437 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 BRAPQ7Z569 592 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 FBXO11Q86XK2 927 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 TNPO1Q92973 898 aaKnown RBP22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 TNFRSF25Q93038 417 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 KCNJ14Q9UNX9 436 aa22.37■■□□□ 1.17
CHMP2B-204ENST00000472024 SPDYE16A6NNV3 312 aaPredicted RBP22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 VWA5AO00534 786 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 ICAM1P05362 532 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 SLC10A3P09131 477 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 GUCY1B3Q02153 619 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 SAFBQ15424 915 aaKnown RBP eCLIP22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 PIBF1Q8WXW3 757 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 GLT8D2Q9H1C3 349 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 PCDHA4Q9UN74 947 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 ATP6V1DQ9Y5K8 247 aa22.36■■□□□ 1.17
CHMP2B-204ENST00000472024 NAPAP54920 295 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 GHRHRQ02643 423 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 GADL1Q6ZQY3 521 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 ANKRD23Q86SG2 305 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 DIS3L2Q8IYB7 885 aaKnown RBP22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 MB21D1Q8N884 522 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 ATG4CQ96DT6 458 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 MAF1Q9H063 256 aa22.35■■□□□ 1.17
CHMP2B-204ENST00000472024 KIF28PB7ZC32 967 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 ZBED4O75132 1171 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 GNA11P29992 359 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 KRT2P35908 639 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 BRI3BPQ8WY22 251 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 COA7Q96BR5 231 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 BRMS1Q9HCU9 246 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 ZCCHC17Q9NP64 241 aaKnown RBP22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 RIC8AQ9NPQ8 531 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 PCDHA1Q9Y5I3 950 aa22.34■■□□□ 1.17
CHMP2B-204ENST00000472024 ABCB11O95342 1321 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 FAM155AB1AL88 458 aaPredicted RBP22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 ZNF157P51786 506 aaPredicted RBP22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 FOSBP53539 338 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 NLRP5P59047 1200 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 BLIDQ8IZY5 108 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 BICD2Q8TD16 824 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 CCDC102AQ96A19 550 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 ASCC2Q9H1I8 757 aaPredicted RBP22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 C6orf50Q9HD87 102 aa22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 ZNF214Q9UL59 606 aaPredicted RBP22.33■■□□□ 1.17
CHMP2B-204ENST00000472024 CCL15-CCL14A0A0B4J2E2 113 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 SMCO2A6NFE2 343 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 BTBD18B2RXH4 712 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 CLK2P49760 499 aaKnown RBP22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 CCL15Q16663 113 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 ATL3Q6DD88 541 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 POTEEQ6S8J3 1075 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 FERMT3Q86UX7 667 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 NOSTRINQ8IVI9 506 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 OXER1Q8TDS5 423 aa22.32■■□□□ 1.16
CHMP2B-204ENST00000472024 MANSC4A6NHS7 340 aaPredicted RBP22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 PIK3CDO00329 1044 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 OPLAHO14841 1288 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 OSBPP22059 807 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 SNAP25P60880 206 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 PNMA3Q9UL41 463 aa22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 MRPL11Q9Y3B7 192 aaKnown RBP22.31■■□□□ 1.16
CHMP2B-204ENST00000472024 BTBD19C9JJ37 291 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 ADCY7P51828 1080 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 MRPL12P52815 198 aaKnown RBP22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 HERVK_113P62684 666 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms