RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 CCDC85BQ15834 202 aaPredicted RBP23.74■■□□□ 1.39
CCDC78-208ENST00000471861 HERVK_113Q902F9 699 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 HAUS7Q99871 368 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 NKX2-4Q9H2Z4 354 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 RAVER2Q9HCJ3 691 aaKnown RBP23.74■■□□□ 1.39
CCDC78-208ENST00000471861 IL23AQ9NPF7 189 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 NYAP2Q9P242 653 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 ASTN1O14525 1302 aa23.74■■□□□ 1.39
CCDC78-208ENST00000471861 SLC4A3P48751 1232 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 NKX3-2P78367 333 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 GNASQ5JWF2 1037 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 PRPF38AQ8NAV1 312 aaKnown RBP23.73■■□□□ 1.39
CCDC78-208ENST00000471861 VTI1AQ96AJ9 217 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC78-208ENST00000471861 SLC38A10Q9HBR0 1119 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 ARPP21Q9UBL0 812 aaPredicted RBP23.73■■□□□ 1.39
CCDC78-208ENST00000471861 LRRC37A2A6NM11 1700 aa23.73■■□□□ 1.39
CCDC78-208ENST00000471861 MYO9BQ13459 2157 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 IGKV6D-41A0A0C4DH26 115 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.72■■□□□ 1.39
CCDC78-208ENST00000471861 BEX3Q00994 111 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 CCDC144CPQ8IYA2 1237 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 STK11IPQ8N1F8 1099 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 SLC43A3Q8NBI5 491 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 DDRGK1Q96HY6 314 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 UHRF1Q96T88 793 aaPredicted RBP23.72■■□□□ 1.39
CCDC78-208ENST00000471861 SPC25Q9HBM1 224 aa23.72■■□□□ 1.39
CCDC78-208ENST00000471861 PTGS1P23219 599 aa23.71■■□□□ 1.39
CCDC78-208ENST00000471861 MRPS5P82675 430 aaKnown RBP23.71■■□□□ 1.39
CCDC78-208ENST00000471861 RAB30Q15771 203 aa23.71■■□□□ 1.39
CCDC78-208ENST00000471861 TLR3O15455 904 aaKnown RBP23.7■■□□□ 1.38
CCDC78-208ENST00000471861 IGFBP4P22692 258 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 CNTN2Q02246 1040 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 SBK1Q52WX2 424 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 ANKRD35Q8N283 1001 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 KIFC2Q96AC6 838 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 VWCEQ96DN2 955 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 MSRAQ9UJ68 235 aa23.7■■□□□ 1.38
CCDC78-208ENST00000471861 MYH4Q9Y623 1939 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 GRIN2DO15399 1336 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 ZBED4O75132 1171 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 CXCL17Q6UXB2 119 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 STRBPQ96SI9 672 aaKnown RBP23.69■■□□□ 1.38
CCDC78-208ENST00000471861 HIPK3Q9H422 1215 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 BDP1A6H8Y1 2624 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 NCOR1O75376 2440 aa23.69■■□□□ 1.38
CCDC78-208ENST00000471861 GSG1L2A8MUP6 293 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 OTOP2Q7RTS6 562 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 FAM133AQ8N9E0 248 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 CHST13Q8NET6 341 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 NECAB3Q96P71 396 aaPredicted RBP23.68■■□□□ 1.38
CCDC78-208ENST00000471861 WNT8AQ9H1J5 351 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 CLIP2Q9UDT6 1046 aa23.68■■□□□ 1.38
CCDC78-208ENST00000471861 GNEQ9Y223 722 aaKnown RBP23.68■■□□□ 1.38
CCDC78-208ENST00000471861 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
CCDC78-208ENST00000471861 RAB11FIP3O75154 756 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 FGBP02675 491 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 RABGGTBP53611 331 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 RPAP2Q8IXW5 612 aaPredicted RBP23.67■■□□□ 1.38
CCDC78-208ENST00000471861 NOC4LQ9BVI4 516 aaKnown RBP23.67■■□□□ 1.38
CCDC78-208ENST00000471861 SLC28A3Q9HAS3 691 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 EPB41L4AQ9HCS5 686 aaPredicted RBP23.67■■□□□ 1.38
CCDC78-208ENST00000471861 HOMER2Q9NSB8 354 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 FBXO40Q9UH90 709 aa23.67■■□□□ 1.38
CCDC78-208ENST00000471861 MYOGP15173 224 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 PLA2G5P39877 138 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 OAZ1P54368 228 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 CCL23P55773 120 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 LRRC47Q8N1G4 583 aaKnown RBP23.66■■□□□ 1.38
CCDC78-208ENST00000471861 CEP95Q96GE4 821 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 MKNK2Q9HBH9 465 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 FEM1BQ9UK73 627 aa23.66■■□□□ 1.38
CCDC78-208ENST00000471861 SOWAHBA6NEL2 793 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 B4GALT4O60513 344 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 TNFAIP2Q03169 654 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 ITGA7Q13683 1181 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 TLK2Q86UE8 772 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 MKL1Q969V6 931 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 TRPV6Q9H1D0 765 aa23.65■■□□□ 1.38
CCDC78-208ENST00000471861 MTIF3Q9H2K0 278 aaKnown RBP23.65■■□□□ 1.38
CCDC78-208ENST00000471861 A1CFQ9NQ94 594 aaKnown RBP23.65■■□□□ 1.38
CCDC78-208ENST00000471861 CTDP1Q9Y5B0 961 aaPredicted RBP23.65■■□□□ 1.38
CCDC78-208ENST00000471861 ZNF536O15090 1300 aa23.64■■□□□ 1.38
CCDC78-208ENST00000471861 MINDY4BA8MYZ0 360 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 HMMRO75330 724 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 PRDM1O75626 825 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 TFF2Q03403 129 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 TMEM63BQ5T3F8 832 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 ZSCAN25Q6NSZ9 544 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 GMCL1P1Q8NEA9 526 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 MTMR4Q9NYA4 1195 aa23.64■■□□□ 1.37
CCDC78-208ENST00000471861 BMP1P13497 986 aa23.63■■□□□ 1.37
CCDC78-208ENST00000471861 FSCN1Q16658 493 aaKnown RBP23.63■■□□□ 1.37
CCDC78-208ENST00000471861 PPP2R2DQ66LE6 453 aa23.63■■□□□ 1.37
CCDC78-208ENST00000471861 GIMAP6Q6P9H5 292 aa23.63■■□□□ 1.37
CCDC78-208ENST00000471861 OSBP2Q969R2 916 aa23.63■■□□□ 1.37
CCDC78-208ENST00000471861 ACAD9Q9H845 621 aa23.63■■□□□ 1.37
CCDC78-208ENST00000471861 TCF20Q9UGU0 1960 aaKnown RBP23.62■■□□□ 1.37
CCDC78-208ENST00000471861 CABYRO75952 493 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms