RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FGRP09769 529 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
USP48-207ENST00000471752 SHHQ15465 462 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 CCSAPQ6IQ19 270 aaPredicted RBP9.6□□□□□ -0.87
USP48-207ENST00000471752 RCSD1Q6JBY9 416 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 TDHQ8IZJ6 230 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 DEFB123Q8N688 67 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 GMCL1P1Q8NEA9 526 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 EVI5LQ96CN4 794 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 XPNPEP3Q9NQH7 507 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 PDLIM7Q9NR12 457 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 PDGFCQ9NRA1 345 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 STX8Q9UNK0 236 aa9.6□□□□□ -0.87
USP48-207ENST00000471752 ZNFX1Q9P2E3 1918 aaKnown RBP9.6□□□□□ -0.87
USP48-207ENST00000471752 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 PDE4AP27815 886 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 NOVP48745 357 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 BEX3Q00994 111 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 PDE4BQ07343 736 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 SNX17Q15036 470 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ALX1Q15699 326 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 KCNA10Q16322 511 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
USP48-207ENST00000471752 CCDC144CPQ8IYA2 1237 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ANKRD35Q8N283 1001 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ARRDC4Q8NCT1 418 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 KLHDC9Q8NEP7 349 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 PPP1R13LQ8WUF5 828 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 STAG1Q8WVM7 1258 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 RILPL2Q969X0 211 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 DDX11Q96FC9 970 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 TMEM47Q9BQJ4 181 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ZKSCAN3Q9BRR0 538 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 NACAP1Q9BZK3 213 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 GPCPD1Q9NPB8 672 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 PRDM5Q9NQX1 630 aaPredicted RBP9.59□□□□□ -0.87
USP48-207ENST00000471752 HELLSQ9NRZ9 838 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
USP48-207ENST00000471752 ANAPC4Q9UJX5 808 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 FEM1BQ9UK73 627 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ZHX1Q9UKY1 873 aaPredicted RBP9.59□□□□□ -0.87
USP48-207ENST00000471752 PRR12Q9ULL5 1215 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 ISY1Q9ULR0 285 aaKnown RBP9.59□□□□□ -0.87
USP48-207ENST00000471752 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 CHD7Q9P2D1 2997 aa9.59□□□□□ -0.87
USP48-207ENST00000471752 FRMPD2Q68DX3 1309 aaPredicted RBP9.58□□□□□ -0.88
USP48-207ENST00000471752 A0A1W2PPC1 479 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 A0A1W2PQ45 241 aaPredicted RBP9.58□□□□□ -0.88
USP48-207ENST00000471752 A0A1W2PQY0 241 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 TRIM6-TRIM34B2RNG4 842 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 KBTBD13C9JR72 458 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 MSCO60682 206 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 RARBP10826 455 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 ALAS1P13196 640 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 SDSP20132 328 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 SLC1A4P43007 532 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 NUCB1Q02818 461 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 ACVR2BQ13705 512 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 CCDC144BQ3MJ40 725 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 LRIT3Q3SXY7 679 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 MCMDC2Q4G0Z9 681 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 MAMDC4Q6UXC1 1216 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 ARMCX2Q7L311 632 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 FAM133AQ8N9E0 248 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 GMCL1Q96IK5 515 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 A1CFQ9NQ94 594 aaKnown RBP9.58□□□□□ -0.88
USP48-207ENST00000471752 MTMR10Q9NXD2 777 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 SLC5A4Q9NY91 659 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 DIS3Q9Y2L1 958 aaKnown RBP9.58□□□□□ -0.88
USP48-207ENST00000471752 PLIN4Q96Q06 1357 aa9.58□□□□□ -0.88
USP48-207ENST00000471752 SYNRGQ9UMZ2 1314 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 MYH8P13535 1937 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 TSPY2A6NKD2 308 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 POTEB2H3BUK9 544 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 ORC4O43929 436 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 PQBP1O60828 265 aaKnown RBP9.57□□□□□ -0.88
USP48-207ENST00000471752 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 ACLYP53396 1101 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 C16orf59Q7L2K0 433 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 CHD1LQ86WJ1 897 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 TBC1D5Q92609 795 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 GUCD1Q96NT3 240 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 TOMM22Q9NS69 142 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 RNF146Q9NTX7 359 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 SUPT16HQ9Y5B9 1047 aaKnown RBP9.57□□□□□ -0.88
USP48-207ENST00000471752 TAF6LQ9Y6J9 622 aa9.57□□□□□ -0.88
USP48-207ENST00000471752 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 NEDD4P46934 1319 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 FRMPD3Q5JV73 1810 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 ZNF236Q9UL36 1845 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 NFIBO00712 420 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 AKR1A1P14550 325 aa9.56□□□□□ -0.88
USP48-207ENST00000471752 SMPD1P17405 629 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms