RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 SENP6Q9GZR1 1112 aaPredicted RBP27.56■■■□□ 2
RNF220-208ENST00000471494 RNF146Q9NTX7 359 aa27.56■■■□□ 2
RNF220-208ENST00000471494 ZNF536O15090 1300 aa27.56■■■□□ 2
RNF220-208ENST00000471494 MYCNP04198 464 aaPredicted RBP27.55■■■□□ 2
RNF220-208ENST00000471494 TKFCQ3LXA3 575 aa27.55■■■□□ 2
RNF220-208ENST00000471494 GJC2Q5T442 439 aaPredicted RBP27.55■■■□□ 2
RNF220-208ENST00000471494 ZMYND8Q9ULU4 1186 aaPredicted RBP27.55■■■□□ 2
RNF220-208ENST00000471494 SYNGAP1Q96PV0 1343 aa27.55■■■□□ 2
RNF220-208ENST00000471494 RARBP10826 455 aa27.54■■■□□ 2
RNF220-208ENST00000471494 SNAP25P60880 206 aa27.54■■■□□ 2
RNF220-208ENST00000471494 LRRC26Q2I0M4 334 aa27.54■■■□□ 2
RNF220-208ENST00000471494 FRMPD2Q68DX3 1309 aaPredicted RBP27.54■■■□□ 2
RNF220-208ENST00000471494 ZNF467Q7Z7K2 595 aaPredicted RBP27.54■■■□□ 2
RNF220-208ENST00000471494 RAD50Q92878 1312 aa27.54■■■□□ 2
RNF220-208ENST00000471494 RBM27Q9P2N5 1060 aaKnown RBP27.54■■■□□ 2
RNF220-208ENST00000471494 ALAS1P13196 640 aa27.53■■■□□ 2
RNF220-208ENST00000471494 TAL1P17542 331 aaPredicted RBP27.53■■■□□ 2
RNF220-208ENST00000471494 MAMDC4Q6UXC1 1216 aa27.53■■■□□ 2
RNF220-208ENST00000471494 IQCA1Q86XH1 822 aa27.53■■■□□ 2
RNF220-208ENST00000471494 RUFY2Q8WXA3 655 aa27.53■■■□□ 2
RNF220-208ENST00000471494 ZKSCAN3Q9BRR0 538 aa27.53■■■□□ 2
RNF220-208ENST00000471494 GPCPD1Q9NPB8 672 aa27.53■■■□□ 2
RNF220-208ENST00000471494 XPNPEP3Q9NQH7 507 aa27.53■■■□□ 2
RNF220-208ENST00000471494 KDM4AO75164 1064 aa27.52■■■□□ 2
RNF220-208ENST00000471494 PDHBP11177 359 aa27.52■■■□□ 2
RNF220-208ENST00000471494 AKR1A1P14550 325 aa27.52■■■□□ 2
RNF220-208ENST00000471494 SLC16A2P36021 539 aa27.52■■■□□ 2
RNF220-208ENST00000471494 SYDE2Q5VT97 1194 aa27.52■■■□□ 2
RNF220-208ENST00000471494 TTBK2Q6IQ55 1244 aa27.52■■■□□ 2
RNF220-208ENST00000471494 TRERF1Q96PN7 1200 aa27.52■■■□□ 2
RNF220-208ENST00000471494 IL25Q9H293 177 aa27.52■■■□□ 2
RNF220-208ENST00000471494 CCPG1Q9ULG6 757 aa27.52■■■□□ 2
RNF220-208ENST00000471494 ZNF865P0CJ78 1059 aaPredicted RBP27.51■■□□□ 1.99
RNF220-208ENST00000471494 CCDC178Q5BJE1 867 aa27.51■■□□□ 1.99
RNF220-208ENST00000471494 BTNL9Q6UXG8 535 aa27.51■■□□□ 1.99
RNF220-208ENST00000471494 RANBP17Q9H2T7 1088 aaKnown RBP27.51■■□□□ 1.99
RNF220-208ENST00000471494 A1CFQ9NQ94 594 aaKnown RBP27.51■■□□□ 1.99
RNF220-208ENST00000471494 ZHX1Q9UKY1 873 aaPredicted RBP27.51■■□□□ 1.99
RNF220-208ENST00000471494 RANBP2P49792 3224 aaKnown RBP27.51■■□□□ 1.99
RNF220-208ENST00000471494 B4E1Z4 1266 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 POTEB2H3BUK9 544 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 ICAM1P05362 532 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 SYN1P17600 705 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 ATN1P54259 1190 aaPredicted RBP27.5■■□□□ 1.99
RNF220-208ENST00000471494 LRRC41Q15345 812 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 DGKHQ86XP1 1220 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 PRO3102Q9H379 93 aa27.5■■□□□ 1.99
RNF220-208ENST00000471494 SNAI1O95863 264 aaPredicted RBP27.49■■□□□ 1.99
RNF220-208ENST00000471494 FXR1P51114 621 aaKnown RBP eCLIP27.49■■□□□ 1.99
RNF220-208ENST00000471494 ZNF543Q08ER8 600 aa27.49■■□□□ 1.99
RNF220-208ENST00000471494 FGD4Q96M96 766 aa27.49■■□□□ 1.99
RNF220-208ENST00000471494 KRT23Q9C075 422 aa27.49■■□□□ 1.99
RNF220-208ENST00000471494 CNNM2Q9H8M5 875 aa27.49■■□□□ 1.99
RNF220-208ENST00000471494 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.49■■□□□ 1.99
RNF220-208ENST00000471494 LCTP09848 1927 aa27.49■■□□□ 1.99
RNF220-208ENST00000471494 CHMLP26374 656 aa27.48■■□□□ 1.99
RNF220-208ENST00000471494 CNTN2Q02246 1040 aa27.48■■□□□ 1.99
RNF220-208ENST00000471494 RNF180Q86T96 592 aa27.48■■□□□ 1.99
RNF220-208ENST00000471494 FAM133AQ8N9E0 248 aa27.48■■□□□ 1.99
RNF220-208ENST00000471494 FAM184BQ9ULE4 1060 aa27.48■■□□□ 1.99
RNF220-208ENST00000471494 MYH6P13533 1939 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 DNAH12Q6ZR08 3092 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 SNHG28P0DPA3 235 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 MUM1L1Q5H9M0 696 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 ARMCX2Q7L311 632 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 LENG1Q96BZ8 264 aaPredicted RBP27.47■■□□□ 1.99
RNF220-208ENST00000471494 ZSCAN10Q96SZ4 725 aaPredicted RBP27.47■■□□□ 1.99
RNF220-208ENST00000471494 ABHD16BQ9H3Z7 469 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 KAT14Q9H8E8 782 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 LRRC37A2A6NM11 1700 aa27.47■■□□□ 1.99
RNF220-208ENST00000471494 PGK1P00558 417 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 ADCYAP1R1P41586 468 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 ACVR2BQ13705 512 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 GPATCH4Q5T3I0 446 aaKnown RBP27.46■■□□□ 1.99
RNF220-208ENST00000471494 CCDC144CPQ8IYA2 1237 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 PNMA1Q8ND90 353 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 ZSWIM5Q9P217 1185 aa27.46■■□□□ 1.99
RNF220-208ENST00000471494 A0A1W2PPC1 479 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 RTP1P59025 263 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 NSMFQ6X4W1 530 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 GDF15Q99988 308 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 UBAC1Q9BSL1 405 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 CYP39A1Q9NYL5 469 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 PNMA2Q9UL42 364 aa27.45■■□□□ 1.98
RNF220-208ENST00000471494 TNKSO95271 1327 aa27.44■■□□□ 1.98
RNF220-208ENST00000471494 ENAHQ8N8S7 591 aaPredicted RBP27.44■■□□□ 1.98
RNF220-208ENST00000471494 FERMT2Q96AC1 680 aa27.44■■□□□ 1.98
RNF220-208ENST00000471494 PHF24Q9UPV7 400 aa27.44■■□□□ 1.98
RNF220-208ENST00000471494 ATP11BQ9Y2G3 1177 aa27.44■■□□□ 1.98
RNF220-208ENST00000471494 SYNRGQ9UMZ2 1314 aa27.43■■□□□ 1.98
RNF220-208ENST00000471494 SOWAHBA6NEL2 793 aa27.43■■□□□ 1.98
RNF220-208ENST00000471494 ASB14A6NK59 587 aa27.43■■□□□ 1.98
RNF220-208ENST00000471494 MAGEA10P43363 369 aaPredicted RBP27.43■■□□□ 1.98
RNF220-208ENST00000471494 SLC39A5Q6ZMH5 540 aa27.43■■□□□ 1.98
RNF220-208ENST00000471494 ANKS1AQ92625 1134 aa27.43■■□□□ 1.98
RNF220-208ENST00000471494 ADAMTS4O75173 837 aa27.42■■□□□ 1.98
RNF220-208ENST00000471494 GOLGA8HP0CJ92 632 aa27.42■■□□□ 1.98
RNF220-208ENST00000471494 BMP8BP34820 402 aa27.42■■□□□ 1.98
RNF220-208ENST00000471494 TRDNQ13061 729 aa27.42■■□□□ 1.98
RNF220-208ENST00000471494 CCDC144BQ3MJ40 725 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms