RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
HOXB3-206ENST00000471459 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
HOXB3-206ENST00000471459 RNF180Q86T96 592 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 CCPG1Q9ULG6 757 aa17.51■□□□□ 0.39
HOXB3-206ENST00000471459 PFASO15067 1338 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 ZNF236Q9UL36 1845 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
HOXB3-206ENST00000471459 GPATCH4Q5T3I0 446 aaKnown RBP17.5■□□□□ 0.39
HOXB3-206ENST00000471459 SYDE2Q5VT97 1194 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 BTNL9Q6UXG8 535 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 ZKSCAN3Q9BRR0 538 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 XPNPEP3Q9NQH7 507 aa17.5■□□□□ 0.39
HOXB3-206ENST00000471459 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
HOXB3-206ENST00000471459 FRMPD2Q68DX3 1309 aaPredicted RBP17.49■□□□□ 0.39
HOXB3-206ENST00000471459 ASB14A6NK59 587 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 SLC34A2O95436 690 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 ICAM1P05362 532 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 PDHBP11177 359 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 CHMLP26374 656 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 SLC16A2P36021 539 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 ZSCAN10Q96SZ4 725 aaPredicted RBP17.49■□□□□ 0.39
HOXB3-206ENST00000471459 ABHD16BQ9H3Z7 469 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 PRKAG2Q9UGJ0 569 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
HOXB3-206ENST00000471459 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
HOXB3-206ENST00000471459 NEDD4P46934 1319 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 B4E1Z4 1266 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 SNAP25P60880 206 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 KIAA1211Q6ZU35 1233 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 RANBP17Q9H2T7 1088 aaKnown RBP17.48■□□□□ 0.39
HOXB3-206ENST00000471459 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
HOXB3-206ENST00000471459 ZMYND8Q9ULU4 1186 aaPredicted RBP17.48■□□□□ 0.39
HOXB3-206ENST00000471459 ZNF536O15090 1300 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
HOXB3-206ENST00000471459 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
HOXB3-206ENST00000471459 ACVR2BQ13705 512 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 LRRC41Q15345 812 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 NSMFQ6X4W1 530 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 ANKS1AQ92625 1134 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
HOXB3-206ENST00000471459 CEP290O15078 2479 aa17.47■□□□□ 0.39
HOXB3-206ENST00000471459 ERICH2A1L162 156 aa17.46■□□□□ 0.39
HOXB3-206ENST00000471459 SNAI1O95863 264 aaPredicted RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 TAL1P17542 331 aaPredicted RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
HOXB3-206ENST00000471459 CNTN2Q02246 1040 aa17.46■□□□□ 0.39
HOXB3-206ENST00000471459 ARMCX2Q7L311 632 aa17.46■□□□□ 0.39
HOXB3-206ENST00000471459 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
HOXB3-206ENST00000471459 A0A1W2PPC1 479 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 PGK1P00558 417 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 SYN1P17600 705 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
HOXB3-206ENST00000471459 SLC39A5Q6ZMH5 540 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
HOXB3-206ENST00000471459 CENPQQ7L2Z9 268 aaPredicted RBP17.45■□□□□ 0.38
HOXB3-206ENST00000471459 RALYLQ86SE5 291 aaKnown RBP17.45■□□□□ 0.38
HOXB3-206ENST00000471459 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 FAM133AQ8N9E0 248 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
HOXB3-206ENST00000471459 TNKSO95271 1327 aa17.45■□□□□ 0.38
HOXB3-206ENST00000471459 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 PARP14Q460N5 1801 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 PTPDC1A2A3K4 754 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 B4DLN1 442 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 SGSM2O43147 1006 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 DUSP11O75319 330 aaKnown RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 SART3Q15020 963 aaKnown RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 NUP133Q8WUM0 1156 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 FERMT2Q96AC1 680 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
HOXB3-206ENST00000471459 CYP39A1Q9NYL5 469 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
HOXB3-206ENST00000471459 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
HOXB3-206ENST00000471459 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
HOXB3-206ENST00000471459 BMP8BP34820 402 aa17.43■□□□□ 0.38
HOXB3-206ENST00000471459 RTP1P59025 263 aa17.43■□□□□ 0.38
HOXB3-206ENST00000471459 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
HOXB3-206ENST00000471459 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
HOXB3-206ENST00000471459 PCSK9Q8NBP7 692 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms