RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	ARID3A	Q99856	593 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	TRIM56	Q9BRZ2	755 aa	Known RBP	4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	DNAJC25	Q9H1X3	360 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	RWDD1	Q9H446	243 aa	Predicted RBP	4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	CARS2	Q9HA77	564 aa	Known RBP	4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	C19orf73	Q9NVV2	129 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	TRAK1	Q9UPV9	953 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	NEXMIF	Q5QGS0	1516 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	MAP2	P11137	1827 aa	Known RBP	4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	MYO5B	Q9ULV0	1848 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	NOS1	P29475	1434 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	PPIP5K1	Q6PFW1	1433 aa		4.55	□□□□□ -1.68
CSMD2-208	ENST00000471438	ADCY9	O60503	1353 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	ANKRD36B	Q8N2N9	1353 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	DLG5	Q8TDM6	1919 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	ABCC11	Q96J66	1382 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	B3GALT4	O96024	378 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	SLFN14	P0C7P3	912 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	PTPN12	Q05209	780 aa	Known RBP	4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	ORC1	Q13415	861 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	SMC5	Q8IY18	1101 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	TCP11L2	Q8N4U5	519 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	SNX21	Q969T3	373 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	ZNF428	Q96B54	188 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	HEXIM2	Q96MH2	286 aa	Known RBP	4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	GTF2IRD1	Q9UHL9	959 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	PCOLCE2	Q9UKZ9	415 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	GNE	Q9Y223	722 aa	Known RBP	4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	TULP4	Q9NRJ4	1543 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	CUL9	Q8IWT3	2517 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	UBR1	Q8IWV7	1749 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	MARF1	Q9Y4F3	1742 aa	Known RBP	4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	NSD3	Q9BZ95	1437 aa		4.54	□□□□□ -1.68
CSMD2-208	ENST00000471438	CACNA1F	O60840	1977 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	SRF	P11831	508 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ATF3	P18847	181 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ITPKA	P23677	461 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	RBM25	P49756	843 aa	Known RBP	4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ID3	Q02535	119 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	MVP	Q14764	893 aa	Known RBP	4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	TCERG1L	Q5VWI1	586 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	CLEC17A	Q6ZS10	378 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	CCDC146	Q8IYE0	955 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ABHD4	Q8TB40	342 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	CCDC74A	Q96AQ1	378 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ALKBH8	Q96BT7	664 aa	Known RBP	4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	DMRTB1	Q96MA1	342 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	PLEKHF1	Q96S99	279 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	RBCK1	Q9BYM8	510 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	NIF3L1	Q9GZT8	377 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	ZNF576	Q9H609	170 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	MYH16	Q9H6N6	1097 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	NPHS2	Q9NP85	383 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	NLRP2	Q9NX02	1062 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	TMEM131L	A2VDJ0	1609 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	TUBGCP6	Q96RT7	1819 aa		4.53	□□□□□ -1.68
CSMD2-208	ENST00000471438	PIK3R4	Q99570	1358 aa		4.53	□□□□□ -1.69
CSMD2-208	ENST00000471438	MAP3K5	Q99683	1374 aa		4.53	□□□□□ -1.69
CSMD2-208	ENST00000471438	KIF16B	Q96L93	1317 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	TMEM238L	A0A1B0GVL6	79 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	SOWAHD	A6NJG2	315 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	EIF1AY	O14602	144 aa	Known RBP	4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	TOMM70	O94826	608 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	RLBP1	P12271	317 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	HCLS1	P14317	486 aa	Predicted RBP	4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	LIG1	P18858	919 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	RGS3	P49796	1198 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	CLCN7	P51798	805 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	PPP2R3A	Q06190	1150 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	TTLL4	Q14679	1199 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	NKPD1	Q17RQ9	610 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	ALDH1L2	Q3SY69	923 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	ZKSCAN2	Q63HK3	967 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	MORC1	Q86VD1	984 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	PANK1	Q8TE04	598 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	CCDC120	Q96HB5	630 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	CFAP53	Q96M91	514 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	PRDM10	Q9NQV6	1147 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	DISC1	Q9NRI5	854 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	CHMP5	Q9NZZ3	219 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	KIF24	Q5T7B8	1368 aa		4.52	□□□□□ -1.69
CSMD2-208	ENST00000471438	SLIT1	O75093	1534 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	CD163L1	Q9NR16	1453 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	KIF3B	O15066	747 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	EIF5B	O60841	1220 aa	Known RBP	4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	TRIM13	O60858	407 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	RAC2	P15153	192 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	PTMS	P20962	102 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	LTK	P29376	864 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	MCM4	P33991	863 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	MTHFS	P49914	203 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	PRPF40B	Q6NWY9	871 aa	Known RBP	4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	DTHD1	Q6ZMT9	781 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	SLC17A8	Q8NDX2	589 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	UBE2Q2	Q8WVN8	375 aa		4.51	□□□□□ -1.69
CSMD2-208	ENST00000471438	ARHGAP45	Q92619	1136 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms