RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 TJP2Q9UDY2 1190 aa8.4□□□□□ -1.06
GTF2B-204ENST00000471296 USP6P35125 1406 aa8.39□□□□□ -1.07
GTF2B-204ENST00000471296 FAM155AB1AL88 458 aaPredicted RBP8.39□□□□□ -1.07
GTF2B-204ENST00000471296 CST3P01034 146 aaPredicted RBP8.39□□□□□ -1.07
GTF2B-204ENST00000471296 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
GTF2B-204ENST00000471296 CLCN7P51798 805 aa8.39□□□□□ -1.07
GTF2B-204ENST00000471296 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
GTF2B-204ENST00000471296 CDH24Q86UP0 819 aa8.39□□□□□ -1.07
GTF2B-204ENST00000471296 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
GTF2B-204ENST00000471296 USP32Q8NFA0 1604 aa8.39□□□□□ -1.07
GTF2B-204ENST00000471296 KTN1Q86UP2 1357 aaKnown RBP8.38□□□□□ -1.07
GTF2B-204ENST00000471296 DISP3Q9P2K9 1392 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 ITSN1Q15811 1721 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 CBX7O95931 251 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 PGRP06401 933 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 TMC4Q7Z404 712 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 MFSD4AQ8N468 514 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 FAM168AQ92567 244 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 KRTAP9-9Q9BYP9 154 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 KRTAP9-4Q9BYQ2 154 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 SEMA3GQ9NS98 782 aa8.38□□□□□ -1.07
GTF2B-204ENST00000471296 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
GTF2B-204ENST00000471296 EDC4Q6P2E9 1401 aaKnown RBP8.37□□□□□ -1.07
GTF2B-204ENST00000471296 ANKRD36BQ8N2N9 1353 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 SHPRHQ149N8 1683 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 MED1Q15648 1581 aaPredicted RBP8.37□□□□□ -1.07
GTF2B-204ENST00000471296 H3BS24 57 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 ZNF865P0CJ78 1059 aaPredicted RBP8.37□□□□□ -1.07
GTF2B-204ENST00000471296 TSNAXIP1Q2TAA8 658 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 CARS2Q9HA77 564 aaKnown RBP8.37□□□□□ -1.07
GTF2B-204ENST00000471296 CAPN6Q9Y6Q1 641 aa8.37□□□□□ -1.07
GTF2B-204ENST00000471296 USP31Q70CQ4 1352 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 TTC21BQ7Z4L5 1316 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 ST13P50502 369 aaKnown RBP8.36□□□□□ -1.07
GTF2B-204ENST00000471296 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
GTF2B-204ENST00000471296 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 TMEM87BQ96K49 555 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
GTF2B-204ENST00000471296 SLC12A5Q9H2X9 1139 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 CORINQ9Y5Q5 1042 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
GTF2B-204ENST00000471296 USP19O94966 1318 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 RPL6Q02878 288 aaKnown RBP8.35□□□□□ -1.07
GTF2B-204ENST00000471296 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
GTF2B-204ENST00000471296 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
GTF2B-204ENST00000471296 C22orf34Q6ZV56 151 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
GTF2B-204ENST00000471296 KCNH5Q8NCM2 988 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 TACC3Q9Y6A5 838 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 COL22A1Q8NFW1 1626 aaPredicted RBP8.35□□□□□ -1.07
GTF2B-204ENST00000471296 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
GTF2B-204ENST00000471296 LRP6O75581 1613 aa8.34□□□□□ -1.07
GTF2B-204ENST00000471296 C8AP07357 584 aa8.34□□□□□ -1.07
GTF2B-204ENST00000471296 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
GTF2B-204ENST00000471296 ACSF2Q96CM8 615 aaPredicted RBP8.34□□□□□ -1.07
GTF2B-204ENST00000471296 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
GTF2B-204ENST00000471296 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
GTF2B-204ENST00000471296 PF4P02776 101 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 RLBP1P12271 317 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 TNK2Q07912 1038 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 UBE2FQ969M7 185 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 C8orf37Q96NL8 207 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
GTF2B-204ENST00000471296 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
GTF2B-204ENST00000471296 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 AFF2P51816 1311 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 UPK3BL1B0FP48 263 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 UPK3BL2E5RIL1 263 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 SORBS3O60504 671 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 F13A1P00488 732 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 PDE4BQ07343 736 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
GTF2B-204ENST00000471296 FYB2Q5VWT5 728 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 SLC6A19Q695T7 634 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 ZNF746Q6NUN9 644 aaPredicted RBP8.32□□□□□ -1.08
GTF2B-204ENST00000471296 MCATQ8IVS2 390 aaKnown RBP8.32□□□□□ -1.08
GTF2B-204ENST00000471296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.32□□□□□ -1.08
GTF2B-204ENST00000471296 CRELD1Q96HD1 420 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 COG3Q96JB2 828 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 LMCD1Q9NZU5 365 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 ZSWIM5Q9P217 1185 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 CPDO75976 1380 aa8.32□□□□□ -1.08
GTF2B-204ENST00000471296 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
GTF2B-204ENST00000471296 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
GTF2B-204ENST00000471296 WASH4PA8MWX3 477 aa8.31□□□□□ -1.08
GTF2B-204ENST00000471296 GCP02774 474 aa8.31□□□□□ -1.08
GTF2B-204ENST00000471296 DNAJB8Q8NHS0 232 aa8.31□□□□□ -1.08
GTF2B-204ENST00000471296 TRPM3Q9HCF6 1732 aaPredicted RBP8.31□□□□□ -1.08
GTF2B-204ENST00000471296 NSD3Q9BZ95 1437 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 FAM221AA4D161 298 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 CILPO75339 1184 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 PLCG1P19174 1290 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 CYP7A1P22680 504 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 LMNB2Q03252 620 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 ZNF124Q15973 351 aa8.3□□□□□ -1.08
GTF2B-204ENST00000471296 ZSWIM9Q86XI8 627 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms