RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 FAM86C1Q9NVL1 165 aa7.95□□□□□ -1.14
CKS1B-204ENST00000471245 DIP2CQ9Y2E4 1556 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 ASMTLO95671 621 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 CD247P20963 164 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 AUHQ13825 339 aaKnown RBP7.94□□□□□ -1.14
CKS1B-204ENST00000471245 HSP90AA2PQ14568 343 aaPredicted RBP7.94□□□□□ -1.14
CKS1B-204ENST00000471245 PAOXQ6QHF9 649 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 FBLIM1Q8WUP2 373 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 COX4I2Q96KJ9 171 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 C7orf69Q9H7B7 122 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 ARHGEF4Q9NR80 690 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 IFT57Q9NWB7 429 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 PLCH2O75038 1416 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 NCOA1Q15788 1441 aa7.94□□□□□ -1.14
CKS1B-204ENST00000471245 KDM5CP41229 1560 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 REREQ9P2R6 1566 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 ABCA6Q8N139 1617 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 TRAV20A0A0B4J274 112 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 PPM1BO75688 479 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 IBSPP21815 317 aaPredicted RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF227Q86WZ6 799 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 CRACR2BQ8N4Y2 399 aaPredicted RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 RCC1LQ96I51 464 aaKnown RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 AARSD1Q9BTE6 412 aaKnown RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 KCNF1Q9H3M0 494 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 APEX2Q9UBZ4 518 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 NOP58Q9Y2X3 529 aaKnown RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF451Q9Y4E5 1061 aa7.93□□□□□ -1.14
CKS1B-204ENST00000471245 CDK13Q14004 1512 aaKnown RBP7.93□□□□□ -1.14
CKS1B-204ENST00000471245 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 hCG_2014768A0A024R1R8 64 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 A0A087WZG4 1122 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 CAPNS1P04632 268 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 ITGAVP06756 1048 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 ITGA4P13612 1032 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 RXRBP28702 533 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 PPP2R2AP63151 447 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 NFIAQ12857 509 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 BVESQ8NE79 360 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 KISS1RQ969F8 398 aaPredicted RBP7.92□□□□□ -1.14
CKS1B-204ENST00000471245 GP6Q9HCN6 339 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 LRP2BPQ9P2M1 347 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 PCDHB12Q9Y5F1 795 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 COL4A3BPQ9Y5P4 624 aa7.92□□□□□ -1.14
CKS1B-204ENST00000471245 HMX2A2RU54 273 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 DYNC1LI2O43237 492 aaPredicted RBP7.91□□□□□ -1.14
CKS1B-204ENST00000471245 RFPL3O75679 317 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 IGLV1-40P01703 118 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 FGFR1P11362 822 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 FSTP19883 344 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 CDK11BP21127 795 aaKnown RBP7.91□□□□□ -1.14
CKS1B-204ENST00000471245 CYP7A1P22680 504 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 NBPF9Q3BBW0 867 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 DALRD3Q5D0E6 543 aaKnown RBP7.91□□□□□ -1.14
CKS1B-204ENST00000471245 POMZP3Q6PJE2 187 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 ADAT2Q7Z6V5 191 aaKnown RBP7.91□□□□□ -1.14
CKS1B-204ENST00000471245 CDH24Q86UP0 819 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 Q8N3U1 123 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 RIN3Q8TB24 985 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 EXOC2Q96KP1 924 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 FGD4Q96M96 766 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 DBNDD2Q9BQY9 259 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 DHRS4Q9BTZ2 278 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 C1GALT1Q9NS00 363 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 CD2APQ9Y5K6 639 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF518AQ6AHZ1 1483 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 KIF14Q15058 1648 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 MROH2AA6NES4 1674 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 ZNF142P52746 1687 aaPredicted RBP7.91□□□□□ -1.14
CKS1B-204ENST00000471245 CDC42BPBQ9Y5S2 1711 aa7.91□□□□□ -1.14
CKS1B-204ENST00000471245 TRAPPC8Q9Y2L5 1435 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 VIL1P09327 827 aaKnown RBP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 IGBP1P78318 339 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 NFKBIBQ15653 356 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 FOXB2Q5VYV0 432 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 SCUBE1Q8IWY4 988 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 ARHGEF39Q8N4T4 335 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 TOP6BLQ8N6T0 577 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 GIMAP7Q8NHV1 300 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 NINJ1Q92982 152 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 PPP1R14AQ96A00 147 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 MRGPRX3Q96LB0 322 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 CDC6Q99741 560 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 NCOA5Q9HCD5 579 aaKnown RBP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 SUGT1Q9Y2Z0 365 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 EMC9Q9Y3B6 208 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 MRPS23Q9Y3D9 190 aaKnown RBP7.9□□□□□ -1.14
CKS1B-204ENST00000471245 FHOD1Q9Y613 1164 aa7.9□□□□□ -1.14
CKS1B-204ENST00000471245 AGLP35573 1532 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 DNAJC25-GNG10A0A024R161 153 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 TRBV23-1A0A0A0MS06 115 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 PLD2O14939 933 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 EOMESO95936 686 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms