RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
SCG5-204ENST00000471027 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
SCG5-204ENST00000471027 CTNNA3Q9UI47 895 aa10.54□□□□□ -0.72
SCG5-204ENST00000471027 Q9Y3F1 56 aa10.54□□□□□ -0.72
SCG5-204ENST00000471027 TMEM265A0A087WTH1 108 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 A0A1W2PQ45 241 aaPredicted RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 A0A1W2PQY0 241 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 PGK1P00558 417 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 FGRP09769 529 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 TRAF1Q13077 416 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 TRIM60Q495X7 471 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 NOL8Q76FK4 1167 aaKnown RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 SEC62Q99442 399 aaKnown RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 AP5M1Q9H0R1 490 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 MTIF3Q9H2K0 278 aaKnown RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 RNF146Q9NTX7 359 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 TMEM39AQ9NV64 488 aa10.53□□□□□ -0.72
SCG5-204ENST00000471027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCG5-204ENST00000471027 MYO5AQ9Y4I1 1855 aaKnown RBP10.53□□□□□ -0.72
SCG5-204ENST00000471027 CEP290O15078 2479 aa10.52□□□□□ -0.72
SCG5-204ENST00000471027 PLXNB2O15031 1838 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 SMIM22K7EJ46 135 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ZNF213O14771 459 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 KIAA0355O15063 1070 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 SNAI1O95863 264 aaPredicted RBP10.52□□□□□ -0.73
SCG5-204ENST00000471027 FGAP02671 866 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ICAM1P05362 532 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 NOVP48745 357 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 GJA9P57773 515 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
SCG5-204ENST00000471027 TNFAIP2Q03169 654 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 TLE2Q04725 743 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 CCDC96Q2M329 555 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 CCDC144BQ3MJ40 725 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 ARMCX2Q7L311 632 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 SMC5Q8IY18 1101 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 RILPL2Q969X0 211 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 FERMT2Q96AC1 680 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 TRERF1Q96PN7 1200 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 RIPK3Q9Y572 518 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 A0A0G2JMZ2 1700 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 RAD50Q92878 1312 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 SALL3Q9BXA9 1300 aa10.52□□□□□ -0.73
SCG5-204ENST00000471027 A0A0U1RQG5 324 aaPredicted RBP10.51□□□□□ -0.73
SCG5-204ENST00000471027 PQBP1O60828 265 aaKnown RBP10.51□□□□□ -0.73
SCG5-204ENST00000471027 HSPD1P10809 573 aaKnown RBP10.51□□□□□ -0.73
SCG5-204ENST00000471027 ALAS1P13196 640 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 NKX3-2P78367 333 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 FPGSQ05932 587 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 KCNA10Q16322 511 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 RRP12Q5JTH9 1297 aaKnown RBP10.51□□□□□ -0.73
SCG5-204ENST00000471027 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 BTNL9Q6UXG8 535 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 CHD1LQ86WJ1 897 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 DGKHQ86XP1 1220 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 TMEM199Q8N511 208 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 FAM133AQ8N9E0 248 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 KLHDC9Q8NEP7 349 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 UPF3AQ9H1J1 476 aaKnown RBP10.51□□□□□ -0.73
SCG5-204ENST00000471027 CNNM2Q9H8M5 875 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 VTA1Q9NP79 307 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 PDLIM7Q9NR12 457 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 MTMR10Q9NXD2 777 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 PRR12Q9ULL5 1215 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 DOCK3Q8IZD9 2030 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
SCG5-204ENST00000471027 TRIOBPQ9H2D6 2365 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
SCG5-204ENST00000471027 KPNA6O60684 536 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 ASGR1P07306 291 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCG5-204ENST00000471027 IMMTQ16891 758 aaKnown RBP10.5□□□□□ -0.73
SCG5-204ENST00000471027 OTUD7AQ8TE49 926 aaPredicted RBP10.5□□□□□ -0.73
SCG5-204ENST00000471027 BADQ92934 168 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 LNPKQ9C0E8 428 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 A1CFQ9NQ94 594 aaKnown RBP10.5□□□□□ -0.73
SCG5-204ENST00000471027 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
SCG5-204ENST00000471027 IL17RBQ9NRM6 502 aa10.5□□□□□ -0.73
SCG5-204ENST00000471027 ARVCFO00192 962 aa10.49□□□□□ -0.73
SCG5-204ENST00000471027 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCG5-204ENST00000471027 TIMP1P01033 207 aa10.49□□□□□ -0.73
SCG5-204ENST00000471027 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms