RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 IL13P35225 146 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 CDK5R2Q13319 367 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 SEZ6L2Q6UXD5 910 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 ZAR1Q86SH2 424 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 PHC3Q8NDX5 983 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 GATA6Q92908 595 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 PRAMEF27A3QJZ7 478 aa9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 PHKG2P15735 406 aa9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 WIPI1Q5MNZ9 446 aaPredicted RBP9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 MIR1-1HGQ9H1L0 117 aa9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 CCNL1Q9UK58 526 aaPredicted RBP9.01□□□□□ -0.97
PTP4A1-202ENST00000470661 NHSQ6T4R5 1651 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 RBM47A0AV96 593 aaKnown RBP9□□□□□ -0.97
PTP4A1-202ENST00000470661 RLBP1P12271 317 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 SSTR4P31391 388 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 NTF4P34130 210 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 ZNF530Q6P9A1 599 aaPredicted RBP9□□□□□ -0.97
PTP4A1-202ENST00000470661 JARID2Q92833 1246 aaPredicted RBP9□□□□□ -0.97
PTP4A1-202ENST00000470661 BCL11AQ9H165 835 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 SPON1Q9HCB6 807 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 ATG3Q9NT62 314 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
PTP4A1-202ENST00000470661 IGSF1Q8N6C5 1336 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 DOT1LQ8TEK3 1739 aa9□□□□□ -0.97
PTP4A1-202ENST00000470661 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 RING1Q06587 406 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 ZBTB37Q5TC79 503 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 HDXQ7Z353 690 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.99□□□□□ -0.974e-6■■■■□ 20.2
PTP4A1-202ENST00000470661 IFNL2Q8IZJ0 200 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 OSBPL1AQ9BXW6 950 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 COPRSQ9NQ92 184 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 TFCP2L1Q9NZI6 479 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 PCOLCE2Q9UKZ9 415 aa8.99□□□□□ -0.97
PTP4A1-202ENST00000470661 U2SURPO15042 1029 aaKnown RBP8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 PF4P02776 101 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 GBP2P32456 591 aaPredicted RBP8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 ITPK1Q13572 414 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 PLEKHO1Q53GL0 409 aaPredicted RBP8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 ZNF765Q7L2R6 523 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 CYFIP1Q7L576 1253 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 Q8N3U1 123 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 GIMAP7Q8NHV1 300 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 PNPLA7Q6ZV29 1317 aa8.98□□□□□ -0.97
PTP4A1-202ENST00000470661 ANKRD26Q9UPS8 1709 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 DIAPH1O60610 1272 aaKnown RBP8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 MED26O95402 600 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 HOXA10P31260 410 aaPredicted RBP8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 FAM160A1Q05DH4 1040 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 LDLRAD1Q5T700 205 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 RGS22Q8NE09 1264 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 TMEM74Q96NL1 305 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 KBTBD4Q9NVX7 518 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 TMOD3Q9NYL9 352 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 UTRNP46939 3433 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 PALLDQ8WX93 1383 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 NCAPD2Q15021 1401 aa8.97□□□□□ -0.97
PTP4A1-202ENST00000470661 MINDY4BA8MYZ0 360 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 FANCGO15287 622 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 FAM87AP0C7U9 286 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 DDX10Q13206 875 aaKnown RBP8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 CAMK2GQ13555 558 aaPredicted RBP8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 LRP8Q14114 963 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 MTHFSDQ2M296 383 aaKnown RBP8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 BNC2Q6ZN30 1099 aaPredicted RBP8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 RELL1Q8IUW5 271 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 RHOVQ96L33 236 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 PIM2Q9P1W9 311 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 LEMD3Q9Y2U8 911 aa8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 GOLGB1Q14789 3259 aaKnown RBP8.96□□□□□ -0.98
PTP4A1-202ENST00000470661 LEFTY1O75610 366 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 PPP2R1AP30153 589 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 CD97P48960 835 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 SLC39A6Q13433 755 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 TSNAXIP1Q2TAA8 658 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 ARTNQ5T4W7 220 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 CDC37L1Q7L3B6 337 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 ERMP1Q7Z2K6 904 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 TMEM87AQ8NBN3 555 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 BACH2Q9BYV9 841 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 FBRSQ9HAH7 460 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 LRRC4CQ9HCJ2 640 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 SNCAIPQ9Y6H5 919 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 ITGB4P16144 1822 aa8.95□□□□□ -0.98
PTP4A1-202ENST00000470661 KDM6AO15550 1401 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms