RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 MTMR14Q8NCE2 650 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 KIAA1524Q8TCG1 905 aa19.24■□□□□ 0.67
SMARCD3-206ENST00000470588 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 NEMFO60524 1076 aa19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 GPATCH4Q5T3I0 446 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 HOMER1Q86YM7 354 aa19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 MKL1Q969V6 931 aa19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 SPTLC3Q9NUV7 552 aa19.23■□□□□ 0.67
SMARCD3-206ENST00000470588 ATRNL1Q5VV63 1379 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 FRMPD2Q68DX3 1309 aaPredicted RBP19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 BMP6P22004 513 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 PRPHP41219 470 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 NONOQ15233 471 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 INF2Q27J81 1249 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 ZNF70Q9UC06 446 aaPredicted RBP19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 SIPA1L1O43166 1804 aa19.22■□□□□ 0.67
SMARCD3-206ENST00000470588 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 ORC2Q13416 577 aaPredicted RBP19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 GRAMD1CQ8IYS0 662 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 GSDMAQ96QA5 445 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 KANSL2Q9H9L4 492 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 TXLNAP40222 546 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 FANCCQ00597 558 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 DHX8Q14562 1220 aaKnown RBP19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 E2F4Q16254 413 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 FKBP1CQ5VVH2 108 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 SH3BP5LQ7L8J4 393 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 ENOX1Q8TC92 643 aaKnown RBP19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 IFNKQ9P0W0 207 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 PYCARDQ9ULZ3 195 aa19.21■□□□□ 0.67
SMARCD3-206ENST00000470588 CBFA2T2O43439 604 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 ERCC5P28715 1186 aaPredicted RBP19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 AFMP43652 599 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 DPYDQ12882 1025 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 PPP1R18Q6NYC8 613 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 HSD3B7Q9H2F3 369 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 VEZTQ9HBM0 779 aa19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 GREB1LQ9C091 1923 aaPredicted RBP19.2■□□□□ 0.66
SMARCD3-206ENST00000470588 CLRN2A0PK11 232 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 TCP10L2B9ZVM9 353 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 GSDMDP57764 484 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 FAM151AQ8WW52 585 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 FHDC1Q9C0D6 1143 aaPredicted RBP19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 XPO4Q9C0E2 1151 aaKnown RBP19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 JMJD4Q9H9V9 463 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 MYOZ2Q9NPC6 264 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 FZD9O00144 591 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 TNNI2P48788 182 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 TERF1P54274 439 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 ATP2B2Q01814 1243 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 ARHGAP27Q6ZUM4 889 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 CLEC10AQ8IUN9 316 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 CACTINQ8WUQ7 758 aaKnown RBP19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 DCAF4Q8WV16 495 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 MTMR8Q96EF0 704 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 CSRNP1Q96S65 589 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 CCSER1Q9C0I3 900 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 TMEM60Q9H2L4 133 aa19.19■□□□□ 0.66
SMARCD3-206ENST00000470588 DICER1Q9UPY3 1922 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 ADCY7P51828 1080 aa19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 PDXDC2PQ6P474 469 aa19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 TMEM179Q6ZVK1 233 aa19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 LRRC8AQ8IWT6 810 aa19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 NAP1L5Q96NT1 182 aaPredicted RBP19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 HERC5Q9UII4 1024 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 GJA3Q9Y6H8 435 aa19.18■□□□□ 0.66
SMARCD3-206ENST00000470588 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 EEF2P13639 858 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 CCDC96Q2M329 555 aa19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 DPF2Q92785 391 aa19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 COA7Q96BR5 231 aa19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 AK8Q96MA6 479 aa19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 FANCLQ9NW38 375 aa19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 BIN2Q9UBW5 565 aaPredicted RBP19.17■□□□□ 0.66
SMARCD3-206ENST00000470588 ZNF280AP59817 542 aaPredicted RBP19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 TTBK2Q6IQ55 1244 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 FAM83AQ86UY5 434 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 RIC8AQ9NPQ8 531 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 MYH4Q9Y623 1939 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 ZBTB5O15062 677 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 CCNT1O60563 726 aaKnown RBP19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 SERPINC1P01008 464 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 OR52Z1P0C646 297 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 LMNB1P20700 586 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 UBA7P41226 1012 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 GMPSP49915 693 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms