RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TRIM43Q96BQ3 446 aaPredicted RBP10.69□□□□□ -0.7
XRN1-208ENST00000470537 ZNF576Q9H609 170 aa10.69□□□□□ -0.7
XRN1-208ENST00000470537 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
XRN1-208ENST00000470537 FOCADQ5VW36 1801 aa10.69□□□□□ -0.7
XRN1-208ENST00000470537 MYH1P12882 1939 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 RLFQ13129 1914 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 MAGEB6P1A0A0J9YX57 407 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PQBP1O60828 265 aaKnown RBP10.68□□□□□ -0.7
XRN1-208ENST00000470537 COBLO75128 1261 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 AKR1A1P14550 325 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 SHMT1P34896 483 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PLCD1P51178 756 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PRR20EP86478 221 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PRR20CP86479 221 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PRR20DP86480 221 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PRR20BP86481 221 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PRR20AP86496 221 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 SH3RF1Q7Z6J0 888 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 ERC1Q8IUD2 1116 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 MSL3Q8N5Y2 521 aaKnown RBP10.68□□□□□ -0.7
XRN1-208ENST00000470537 SLC44A5Q8NCS7 719 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
XRN1-208ENST00000470537 TIFAQ96CG3 184 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 CCDC17Q96LX7 622 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 TINF2Q9BSI4 451 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 MTIF3Q9H2K0 278 aaKnown RBP10.68□□□□□ -0.7
XRN1-208ENST00000470537 SPC25Q9HBM1 224 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
XRN1-208ENST00000470537 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 SIPA1L1O43166 1804 aa10.68□□□□□ -0.7
XRN1-208ENST00000470537 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
XRN1-208ENST00000470537 DGAT1O75907 488 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 TIMP1P01033 207 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 TRIM27P14373 513 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 PPIGQ13427 754 aaKnown RBP eCLIP10.67□□□□□ -0.7
XRN1-208ENST00000470537 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 FAM47AQ5JRC9 791 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 PRAMEF19Q5SWL8 479 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 AKNAD1Q5T1N1 836 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 PCSK9Q8NBP7 692 aaKnown RBP10.67□□□□□ -0.7
XRN1-208ENST00000470537 ZNF775Q96BV0 537 aaPredicted RBP10.67□□□□□ -0.7
XRN1-208ENST00000470537 GLT1D1Q96MS3 346 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 MMP19Q99542 508 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 STARD7Q9NQZ5 370 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 NOP58Q9Y2X3 529 aaKnown RBP10.67□□□□□ -0.7
XRN1-208ENST00000470537 TTC28Q96AY4 2481 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
XRN1-208ENST00000470537 CDK5RAP2Q96SN8 1893 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 A0A1W2PQ45 241 aaPredicted RBP10.66□□□□□ -0.7
XRN1-208ENST00000470537 A0A1W2PQY0 241 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 STAT3P40763 770 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 GABPAQ06546 454 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 GRIN2CQ14957 1233 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 MFSD5Q6N075 450 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 CCDC129Q6ZRS4 1044 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 TMEM199Q8N511 208 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 CCDC8Q9H0W5 538 aaPredicted RBP10.66□□□□□ -0.7
XRN1-208ENST00000470537 VCPKMTQ9H867 229 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 DBNLQ9UJU6 430 aaKnown RBP10.66□□□□□ -0.7
XRN1-208ENST00000470537 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 TMX2Q9Y320 296 aa10.66□□□□□ -0.7
XRN1-208ENST00000470537 ELP1O95163 1332 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 A0A1W2PRG0 241 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 TLR3O15455 904 aaKnown RBP10.65□□□□□ -0.7
XRN1-208ENST00000470537 PGK1P00558 417 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 GUCY1A2P33402 732 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 ACLYP53396 1101 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
XRN1-208ENST00000470537 ICA1Q05084 483 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 ZKSCAN2Q63HK3 967 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 RIOX2Q8IUF8 465 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 VTI1AQ96AJ9 217 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 RIOK1Q9BRS2 568 aaKnown RBP10.65□□□□□ -0.7
XRN1-208ENST00000470537 SLC6A16Q9GZN6 736 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 KANSL2Q9H9L4 492 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 THEGQ9P2T0 379 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 ADAMTS5Q9UNA0 930 aa10.65□□□□□ -0.7
XRN1-208ENST00000470537 CDH23Q9H251 3354 aa10.65□□□□□ -0.71
XRN1-208ENST00000470537 ROBO3Q96MS0 1386 aa10.65□□□□□ -0.71
XRN1-208ENST00000470537 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 DUSP11O75319 330 aaKnown RBP10.64□□□□□ -0.71
XRN1-208ENST00000470537 BCAR3O75815 825 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 OATP04181 439 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 FAAP100Q0VG06 881 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 TMEM132BQ14DG7 1078 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 RAB30Q15771 203 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 AAK1Q2M2I8 961 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 PSRC1Q6PGN9 363 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms