RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 FAM196BA6NMK8 535 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 HSPA1AP0DMV8 641 aaKnown RBP12.52□□□□□ -0.41
SND1-208ENST00000470463 HSPA1BP0DMV9 641 aaKnown RBP12.52□□□□□ -0.41
SND1-208ENST00000470463 PFKFB1P16118 471 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 PRPHP41219 470 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 NDUFA8P51970 172 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 CUL5Q93034 780 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 SHISA4Q96DD7 197 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
SND1-208ENST00000470463 GOLPH3LQ9H4A5 285 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 PGAP2Q9UHJ9 254 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 KCNH3Q9ULD8 1083 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
SND1-208ENST00000470463 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.41
SND1-208ENST00000470463 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 NDUFB10O96000 172 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
SND1-208ENST00000470463 LONP1P36776 959 aaKnown RBP12.51□□□□□ -0.41
SND1-208ENST00000470463 TXLNAP40222 546 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 STAT2P52630 851 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 TYRO3Q06418 890 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
SND1-208ENST00000470463 CAMK4Q16566 473 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 STX1AQ16623 288 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 SYDE2Q5VT97 1194 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 SIAH1Q8IUQ4 282 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 LPAR1Q92633 364 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 AMNQ9BXJ7 453 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 VCPKMTQ9H867 229 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
SND1-208ENST00000470463 RAD21O60216 631 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 GCFC2P16383 781 aaKnown RBP12.5□□□□□ -0.41
SND1-208ENST00000470463 USP14P54578 494 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 PTGDRQ13258 359 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 AP3B2Q13367 1082 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 TBC1D10BQ4KMP7 808 aaPredicted RBP12.5□□□□□ -0.41
SND1-208ENST00000470463 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 NEK8Q86SG6 692 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 AK8Q96MA6 479 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
SND1-208ENST00000470463 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 USP17L10C9JJH3 530 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
SND1-208ENST00000470463 FDX1P10109 184 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 MCM7P33993 719 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 ZNF174Q15697 407 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
SND1-208ENST00000470463 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 CNNM3Q8NE01 707 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 PSTPIP2Q9H939 334 aa12.49□□□□□ -0.41
SND1-208ENST00000470463 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 QRICH1Q2TAL8 776 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
SND1-208ENST00000470463 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 FEZ1Q99689 392 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
SND1-208ENST00000470463 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
SND1-208ENST00000470463 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
SND1-208ENST00000470463 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
SND1-208ENST00000470463 NEMFO60524 1076 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 SLC16A2P36021 539 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
SND1-208ENST00000470463 USP11P51784 963 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
SND1-208ENST00000470463 INF2Q27J81 1249 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
SND1-208ENST00000470463 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 MOXD1Q6UVY6 613 aa12.47□□□□□ -0.41
SND1-208ENST00000470463 RASGRP2Q7LDG7 609 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms