RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TEX13BQ9BXU2 312 aa10.72□□□□□ -0.69
SYNGAP1-205ENST00000470232 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-205ENST00000470232 GBF1Q92538 1859 aa10.72□□□□□ -0.69
SYNGAP1-205ENST00000470232 MYO5AQ9Y4I1 1855 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-205ENST00000470232 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
SYNGAP1-205ENST00000470232 FAM86C2PA6NEL3 165 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 SURF6O75683 361 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 ALADP13716 330 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 MYOGP15173 224 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 MRE11P49959 708 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 ITGA7Q13683 1181 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 SNRNP48Q6IEG0 339 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 SLC43A3Q8NBI5 491 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 AP5M1Q9H0R1 490 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 KCNH6Q9H252 994 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 FBXO40Q9UH90 709 aa10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 ZNF214Q9UL59 606 aaPredicted RBP10.71□□□□□ -0.69
SYNGAP1-205ENST00000470232 RFXAPO00287 272 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 ZBED4O75132 1171 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 SUPT20HL2P0C7V6 817 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 NKX3-2P78367 333 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 TNFAIP2Q03169 654 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 SIAH1Q8IUQ4 282 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 UIMC1Q96RL1 719 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 SLC9A7Q96T83 725 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 FBXO28Q9NVF7 368 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 LMCD1Q9NZU5 365 aa10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 PRRC2BQ5JSZ5 2229 aaKnown RBP10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 COL11A1P12107 1806 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-205ENST00000470232 DNAJC25-GNG10A0A024R161 153 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 CA3P07451 260 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 AKR1B1P15121 316 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 FAM83BQ5T0W9 1011 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 ARMCX2Q7L311 632 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 PRPF38AQ8NAV1 312 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 REPS2Q8NFH8 660 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 ARNTL2Q8WYA1 636 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 SNX27Q96L92 541 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 SLF1Q9BQI6 1058 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 CERS4Q9HA82 394 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 DCP1AQ9NPI6 582 aaPredicted RBP10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 C11orf16Q9NQ32 467 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
SYNGAP1-205ENST00000470232 UMODL1Q5DID0 1318 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 LRRC37A2A6NM11 1700 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 ASB14A6NK59 587 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 ATP2A1O14983 1001 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 RFC2P35250 354 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 IRX5P78411 483 aaPredicted RBP10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 BEX3Q00994 111 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 FSCN1Q16658 493 aaKnown RBP10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 CXCL17Q6UXB2 119 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 GJD3Q8N144 294 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 CHST13Q8NET6 341 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 DYNLL2Q96FJ2 89 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 TRPV6Q9H1D0 765 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 ANTXR1Q9H6X2 564 aa10.68□□□□□ -0.7
SYNGAP1-205ENST00000470232 MYH8P13535 1937 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 DYNC1LI2O43237 492 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 B4GALT4O60513 344 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 CDK8P49336 464 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 TTLL4Q14679 1199 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 IQSEC1Q6DN90 963 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 TLK2Q86UE8 772 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 CPXCR1Q8N123 301 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 RETREG2Q8NC44 543 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 SSH3Q8TE77 659 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 SCLYQ96I15 445 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 WNT8AQ9H1J5 351 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 Q9Y3F1 56 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 PARP14Q460N5 1801 aa10.67□□□□□ -0.7
SYNGAP1-205ENST00000470232 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 HAX1O00165 279 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 CTAGE5O15320 804 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 ADCY6O43306 1168 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 FDX1P10109 184 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 CYP2D6P10635 497 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 PDE6AP16499 860 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 ANP32AP39687 249 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 RARSP54136 660 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms