RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 CATIPQ7Z7H3 387 aa22.58■■□□□ 1.21
PCGF3-208ENST00000470161 TRMT44Q8IYL2 757 aaKnown RBP22.58■■□□□ 1.21
PCGF3-208ENST00000470161 IGDCC4Q8TDY8 1250 aa22.58■■□□□ 1.21
PCGF3-208ENST00000470161 ZNF333Q96JL9 665 aa22.58■■□□□ 1.21
PCGF3-208ENST00000470161 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
PCGF3-208ENST00000470161 UPF3BQ9BZI7 483 aaKnown RBP22.58■■□□□ 1.21
PCGF3-208ENST00000470161 DHX16O60231 1041 aaKnown RBP22.58■■□□□ 1.2
PCGF3-208ENST00000470161 ADORA2AP29274 412 aa22.58■■□□□ 1.2
PCGF3-208ENST00000470161 ABRAQ8N0Z2 381 aa22.58■■□□□ 1.2
PCGF3-208ENST00000470161 MMP19Q99542 508 aa22.58■■□□□ 1.2
PCGF3-208ENST00000470161 APBA2Q99767 749 aa22.58■■□□□ 1.2
PCGF3-208ENST00000470161 DOCK3Q8IZD9 2030 aa22.57■■□□□ 1.2
PCGF3-208ENST00000470161 HMGB1P09429 215 aaKnown RBP22.57■■□□□ 1.2
PCGF3-208ENST00000470161 SNAP25P60880 206 aa22.57■■□□□ 1.2
PCGF3-208ENST00000470161 USP6NLQ92738 828 aa22.57■■□□□ 1.2
PCGF3-208ENST00000470161 FBXO40Q9UH90 709 aa22.57■■□□□ 1.2
PCGF3-208ENST00000470161 COL11A1P12107 1806 aaPredicted RBP22.56■■□□□ 1.2
PCGF3-208ENST00000470161 CCDC69A6NI79 296 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 HMGCRP04035 888 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 KCNB2Q92953 911 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 UBA5Q9GZZ9 404 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 HOMER2Q9NSB8 354 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 FOXD4L1Q9NU39 408 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 RIPK3Q9Y572 518 aa22.56■■□□□ 1.2
PCGF3-208ENST00000470161 FGD1P98174 961 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 CHST13Q8NET6 341 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 AGBL1Q96MI9 1066 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 RANBP17Q9H2T7 1088 aaKnown RBP22.55■■□□□ 1.2
PCGF3-208ENST00000470161 PNMA2Q9UL42 364 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 CCPG1Q9ULG6 757 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 INHAP05111 366 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 HSP90AA1P07900 732 aaKnown RBP22.55■■□□□ 1.2
PCGF3-208ENST00000470161 ALAS1P13196 640 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 ADCK5Q3MIX3 580 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 DHX32Q7L7V1 743 aaKnown RBP22.55■■□□□ 1.2
PCGF3-208ENST00000470161 ANKRD35Q8N283 1001 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 NUP133Q8WUM0 1156 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 LY9Q9HBG7 655 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 SENP2Q9HC62 589 aa22.55■■□□□ 1.2
PCGF3-208ENST00000470161 ICAM1P05362 532 aa22.54■■□□□ 1.2
PCGF3-208ENST00000470161 SOX10P56693 466 aa22.54■■□□□ 1.2
PCGF3-208ENST00000470161 TKFCQ3LXA3 575 aa22.54■■□□□ 1.2
PCGF3-208ENST00000470161 JAKMIP1Q96N16 626 aaKnown RBP22.54■■□□□ 1.2
PCGF3-208ENST00000470161 LRRC2Q9BYS8 371 aa22.54■■□□□ 1.2
PCGF3-208ENST00000470161 SH2B2O14492 632 aaPredicted RBP22.53■■□□□ 1.2
PCGF3-208ENST00000470161 HOXC6P09630 235 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 PSMA5P28066 241 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 LIFRP42702 1097 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 COL9A3Q14050 684 aaPredicted RBP22.53■■□□□ 1.2
PCGF3-208ENST00000470161 NBR1Q14596 966 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 SYNE3Q6ZMZ3 975 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 TRIB2Q92519 343 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 TRERF1Q96PN7 1200 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 RNF208Q9H0X6 261 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 CPVLQ9H3G5 476 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 ACAD9Q9H845 621 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 VAT1LQ9HCJ6 419 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 ZNF536O15090 1300 aa22.53■■□□□ 1.2
PCGF3-208ENST00000470161 KLRF2D3W0D1 207 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 MTFR1Q15390 333 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 MFSD14CQ5VZR4 134 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 BLOC1S2Q6QNY1 142 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 NOL8Q76FK4 1167 aaKnown RBP22.52■■□□□ 1.2
PCGF3-208ENST00000470161 ADGRF4Q8IZF3 695 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 ZNF654Q8IZM8 581 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 CTCFLQ8NI51 663 aaPredicted RBP22.52■■□□□ 1.2
PCGF3-208ENST00000470161 GPHNQ9NQX3 736 aaPredicted RBP22.52■■□□□ 1.2
PCGF3-208ENST00000470161 RNF146Q9NTX7 359 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 SLC12A7Q9Y666 1083 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 WDR19Q8NEZ3 1342 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 CCL5P13501 91 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 CASTP20810 708 aaKnown RBP22.52■■□□□ 1.2
PCGF3-208ENST00000470161 TROAPQ12815 778 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 CCL14Q16627 93 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 STAG2Q8N3U4 1231 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 MAD2L2Q9UI95 211 aa22.52■■□□□ 1.2
PCGF3-208ENST00000470161 COBLO75128 1261 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 DDAH1O94760 285 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 PGK2P07205 417 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 CPA1P15085 419 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 KIF5BP33176 963 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 GRM4Q14833 912 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 NPLOC4Q8TAT6 608 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 TCEANC2Q96MN5 208 aa22.51■■□□□ 1.19
PCGF3-208ENST00000470161 PALM3A6NDB9 673 aaPredicted RBP22.5■■□□□ 1.19
PCGF3-208ENST00000470161 CALM1P0DP23 149 aa22.5■■□□□ 1.19
PCGF3-208ENST00000470161 CALM2P0DP24 149 aa22.5■■□□□ 1.19
PCGF3-208ENST00000470161 CALM3P0DP25 149 aa22.5■■□□□ 1.19
PCGF3-208ENST00000470161 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
PCGF3-208ENST00000470161 HMX1Q9NP08 348 aaPredicted RBP22.5■■□□□ 1.19
PCGF3-208ENST00000470161 PLXNB2O15031 1838 aa22.5■■□□□ 1.19
PCGF3-208ENST00000470161 PRKAR2AP13861 404 aaKnown RBP22.49■■□□□ 1.19
PCGF3-208ENST00000470161 DDIT3P35638 169 aa22.49■■□□□ 1.19
PCGF3-208ENST00000470161 MCM2P49736 904 aa22.49■■□□□ 1.19
PCGF3-208ENST00000470161 CDC37Q16543 378 aaPredicted RBP22.49■■□□□ 1.19
PCGF3-208ENST00000470161 MAP3K14Q99558 947 aa22.49■■□□□ 1.19
PCGF3-208ENST00000470161 MYL10Q9BUA6 226 aa22.49■■□□□ 1.19
PCGF3-208ENST00000470161 CHMP5Q9NZZ3 219 aa22.49■■□□□ 1.19
PCGF3-208ENST00000470161 RPTORQ8N122 1335 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 601.9 ms