RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ARMCX2Q7L311 632 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 GJD3Q8N144 294 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 SCLYQ96I15 445 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 CCDC17Q96LX7 622 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 FGD4Q96M96 766 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 UIMC1Q96RL1 719 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 SLC9A7Q96T83 725 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 KATNBL1Q9H079 304 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 RIPK3Q9Y572 518 aa14.52□□□□□ -0.09
LSM2-209ENST00000470083 ZNFX1Q9P2E3 1918 aaKnown RBP14.52□□□□□ -0.09
LSM2-209ENST00000470083 ASTN1O14525 1302 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 LPXNO60711 386 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
LSM2-209ENST00000470083 CYP2D6P10635 497 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 ALADP13716 330 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 OS9Q13438 667 aaPredicted RBP14.51□□□□□ -0.09
LSM2-209ENST00000470083 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 PHOSPHO2Q8TCD6 241 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 DYNLL2Q96FJ2 89 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 GOPCQ9HD26 462 aa14.51□□□□□ -0.09
LSM2-209ENST00000470083 DCP1AQ9NPI6 582 aaPredicted RBP14.51□□□□□ -0.09
LSM2-209ENST00000470083 TLR7Q9NYK1 1049 aaKnown RBP14.51□□□□□ -0.09
LSM2-209ENST00000470083 ATP2A1O14983 1001 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 EEF2P13639 858 aaKnown RBP14.5□□□□□ -0.09
LSM2-209ENST00000470083 FSCN1Q16658 493 aaKnown RBP14.5□□□□□ -0.09
LSM2-209ENST00000470083 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 TLK2Q86UE8 772 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 FAM178BQ8IXR5 827 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 ARHGAP45Q92619 1136 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 FBXL18Q96ME1 805 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 SLF1Q9BQI6 1058 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 KANSL2Q9H9L4 492 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 LMCD1Q9NZU5 365 aa14.5□□□□□ -0.09
LSM2-209ENST00000470083 GNEQ9Y223 722 aaKnown RBP14.5□□□□□ -0.09
LSM2-209ENST00000470083 MYO5AQ9Y4I1 1855 aaKnown RBP14.49□□□□□ -0.09
LSM2-209ENST00000470083 KIF28PB7ZC32 967 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 ZEB2O60315 1214 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 ACTN1P12814 892 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 TNFAIP2Q03169 654 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 POLA2Q14181 598 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 NOL8Q76FK4 1167 aaKnown RBP14.49□□□□□ -0.09
LSM2-209ENST00000470083 HERC6Q8IVU3 1022 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 CCDC144CPQ8IYA2 1237 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 SDR42E1Q8WUS8 393 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
LSM2-209ENST00000470083 PARP14Q460N5 1801 aa14.49□□□□□ -0.09
LSM2-209ENST00000470083 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.48□□□□□ -0.09
LSM2-209ENST00000470083 SSTR3P32745 418 aaPredicted RBP14.48□□□□□ -0.09
LSM2-209ENST00000470083 LEXMQ3ZCV2 418 aa14.48□□□□□ -0.09
LSM2-209ENST00000470083 DEFB128Q7Z7B8 93 aa14.48□□□□□ -0.09
LSM2-209ENST00000470083 ANKRD35Q8N283 1001 aa14.48□□□□□ -0.09
LSM2-209ENST00000470083 CCDC8Q9H0W5 538 aaPredicted RBP14.48□□□□□ -0.09
LSM2-209ENST00000470083 UBE2ZQ9H832 354 aaPredicted RBP14.48□□□□□ -0.09
LSM2-209ENST00000470083 FBXO40Q9UH90 709 aa14.48□□□□□ -0.09
LSM2-209ENST00000470083 ANP32CO43423 234 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 RAD21O60216 631 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 SURF6O75683 361 aaKnown RBP14.47□□□□□ -0.09
LSM2-209ENST00000470083 SUPT20HL2P0C7V6 817 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 PDE6AP16499 860 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 RFC2P35250 354 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 PSMC6P62333 389 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 PRPF38AQ8NAV1 312 aaKnown RBP14.47□□□□□ -0.09
LSM2-209ENST00000470083 SSH3Q8TE77 659 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 EAF2Q96CJ1 260 aaPredicted RBP14.47□□□□□ -0.09
LSM2-209ENST00000470083 AP5M1Q9H0R1 490 aa14.47□□□□□ -0.09
LSM2-209ENST00000470083 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
LSM2-209ENST00000470083 NAV1Q8NEY1 1877 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.46□□□□□ -0.09
LSM2-209ENST00000470083 CYP2C9P11712 490 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 CDK8P49336 464 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 SLC9C2Q5TAH2 1124 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 CPXCR1Q8N123 301 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 LCORLQ8N3X6 602 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 CHST13Q8NET6 341 aa14.46□□□□□ -0.09
LSM2-209ENST00000470083 NUP88Q99567 741 aaPredicted RBP14.46□□□□□ -0.09
LSM2-209ENST00000470083 DYNC1LI2O43237 492 aaPredicted RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 DCXO43602 365 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 ZBED4O75132 1171 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 SLC4A3P48751 1232 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 C16orf86Q6ZW13 317 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 USP34Q70CQ2 3546 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 TRMT2AQ8IZ69 625 aaKnown RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 GDPD5Q8WTR4 605 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 SLC38A10Q9HBR0 1119 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 ATP8A2Q9NTI2 1148 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 TRMT13Q9NUP7 481 aaKnown RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 NOP58Q9Y2X3 529 aaKnown RBP14.45□□□□□ -0.1
LSM2-209ENST00000470083 Q9Y3F1 56 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 CFAP54Q96N23 3096 aa14.45□□□□□ -0.1
LSM2-209ENST00000470083 ZNF536O15090 1300 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 TNKSO95271 1327 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 ZNF532Q9HCE3 1301 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 TCRBV5S4A2TA0A5A2 114 aa14.44□□□□□ -0.1
LSM2-209ENST00000470083 POTEB3A0JP26 581 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms