RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
COMMD3-208ENST00000470045 DGKHQ86XP1 1220 aa16.56■□□□□ 0.24
COMMD3-208ENST00000470045 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
COMMD3-208ENST00000470045 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
COMMD3-208ENST00000470045 TINF2Q9BSI4 451 aa16.56■□□□□ 0.24
COMMD3-208ENST00000470045 ISY1Q9ULR0 285 aaKnown RBP16.56■□□□□ 0.24
COMMD3-208ENST00000470045 KDM4AO75164 1064 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 CNGA1P29973 690 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 IKQ13123 557 aaPredicted RBP16.55■□□□□ 0.24
COMMD3-208ENST00000470045 CCDC96Q2M329 555 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 ANKS1AQ92625 1134 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 CHMP4CQ96CF2 233 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 DDX11Q96FC9 970 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 FGD4Q96M96 766 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
COMMD3-208ENST00000470045 NR2E3Q9Y5X4 410 aa16.55■□□□□ 0.24
COMMD3-208ENST00000470045 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 B4E1Z4 1266 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 SGSM2O43147 1006 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 EVI5O60447 810 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 PRAMEF19Q5SWL8 479 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
COMMD3-208ENST00000470045 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 ACAD9Q9H845 621 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 CNNM2Q9H8M5 875 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
COMMD3-208ENST00000470045 DNM1LO00429 736 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 ICAM1P05362 532 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
COMMD3-208ENST00000470045 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 PTH1RQ03431 593 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 KRT23Q9C075 422 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
COMMD3-208ENST00000470045 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
COMMD3-208ENST00000470045 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
COMMD3-208ENST00000470045 TAL1P17542 331 aaPredicted RBP16.52■□□□□ 0.24
COMMD3-208ENST00000470045 SLC16A2P36021 539 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 SNAP25P60880 206 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
COMMD3-208ENST00000470045 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
COMMD3-208ENST00000470045 PRO3102Q9H379 93 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 HOMER2Q9NSB8 354 aa16.52■□□□□ 0.24
COMMD3-208ENST00000470045 TNKSO95271 1327 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 SNAI1O95863 264 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-208ENST00000470045 CYP21A2P08686 494 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 ALAS1P13196 640 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
COMMD3-208ENST00000470045 GPATCH4Q5T3I0 446 aaKnown RBP16.51■□□□□ 0.23
COMMD3-208ENST00000470045 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 COLQQ9Y215 455 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-208ENST00000470045 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 MYH6P13533 1939 aa16.51■□□□□ 0.23
COMMD3-208ENST00000470045 WDR19Q8NEZ3 1342 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 SLC34A2O95436 690 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 AKR1A1P14550 325 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 SEC23AQ15436 765 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 ANO1Q5XXA6 986 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
COMMD3-208ENST00000470045 ASTN1O14525 1302 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 CNTN2Q02246 1040 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 LRRC41Q15345 812 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 LRRC26Q2I0M4 334 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 GJC2Q5T442 439 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-208ENST00000470045 CYB5R4Q7L1T6 521 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 ARMCX2Q7L311 632 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 C7orf61Q8IZ16 206 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-208ENST00000470045 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 DNAH12Q6ZR08 3092 aa16.49■□□□□ 0.23
COMMD3-208ENST00000470045 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 RARBP10826 455 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 XPNPEP3Q9NQH7 507 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 TRIOBPQ9H2D6 2365 aa16.48■□□□□ 0.23
COMMD3-208ENST00000470045 LTBP2Q14767 1821 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms