RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
COMMD2-202ENST00000469896 UMODL1Q5DID0 1318 aa13.81□□□□□ -0.2
COMMD2-202ENST00000469896 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 LPXNO60711 386 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 ZNF792Q3KQV3 632 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 LRP2BPQ9P2M1 347 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
COMMD2-202ENST00000469896 CABYRO75952 493 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 FLOT1O75955 427 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 TTLL4Q14679 1199 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
COMMD2-202ENST00000469896 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 SPATA5Q8NB90 893 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 WNT8AQ9H1J5 351 aa13.79□□□□□ -0.2
COMMD2-202ENST00000469896 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
COMMD2-202ENST00000469896 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 COPB2P35606 906 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 GJA9P57773 515 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
COMMD2-202ENST00000469896 TBC1D9Q6ZT07 1266 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
COMMD2-202ENST00000469896 GDPD5Q8WTR4 605 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 UPF3AQ9H1J1 476 aaKnown RBP13.78□□□□□ -0.2
COMMD2-202ENST00000469896 SERPINB13Q9UIV8 391 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
COMMD2-202ENST00000469896 PPP4CP60510 307 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 ZP2Q05996 745 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 RIF1Q5UIP0 2472 aaKnown RBP13.77□□□□□ -0.21
COMMD2-202ENST00000469896 NAA16Q6N069 864 aaPredicted RBP13.77□□□□□ -0.21
COMMD2-202ENST00000469896 SLC43A3Q8NBI5 491 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 SCLYQ96I15 445 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
COMMD2-202ENST00000469896 TIMM10P62072 90 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 DEFB128Q7Z7B8 93 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 ATG4CQ96DT6 458 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
COMMD2-202ENST00000469896 EHD4Q9H223 541 aa13.76□□□□□ -0.21
COMMD2-202ENST00000469896 TRIOO75962 3097 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 ARHGEF15O94989 841 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 RFC2P35250 354 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 TCF15Q12870 199 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 CXCL17Q6UXB2 119 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 BMP8AQ7Z5Y6 402 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 ATOH1Q92858 354 aaPredicted RBP13.75□□□□□ -0.21
COMMD2-202ENST00000469896 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 TRPV6Q9H1D0 765 aa13.75□□□□□ -0.21
COMMD2-202ENST00000469896 ZEB2O60315 1214 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 B4GALT4O60513 344 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 SNAI1O95863 264 aaPredicted RBP13.74□□□□□ -0.21
COMMD2-202ENST00000469896 SUPT20HL2P0C7V6 817 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 ID4P47928 161 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 KCNJ6P48051 423 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
COMMD2-202ENST00000469896 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 TTC6Q86TZ1 520 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 FAM86C1Q9NVL1 165 aa13.74□□□□□ -0.21
COMMD2-202ENST00000469896 H3BQ06 376 aaPredicted RBP13.73□□□□□ -0.21
COMMD2-202ENST00000469896 STAT3P40763 770 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
COMMD2-202ENST00000469896 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
COMMD2-202ENST00000469896 SH2D4AQ9H788 454 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 MUTYHQ9UIF7 546 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
COMMD2-202ENST00000469896 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
COMMD2-202ENST00000469896 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
COMMD2-202ENST00000469896 BAIAP3O94812 1187 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 IRS1P35568 1242 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 USP5P45974 858 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 NKX3-2P78367 333 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 SEPT2Q15019 361 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 CERS3Q8IU89 383 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 EDAQ92838 391 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
COMMD2-202ENST00000469896 SUGCTQ9HAC7 445 aa13.72□□□□□ -0.21
COMMD2-202ENST00000469896 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms