RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 CDC37Q16543 378 aaPredicted RBP11.99□□□□□ -0.49
THBS3-206ENST00000469769 QRICH1Q2TAL8 776 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 TREML2Q5T2D2 321 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 WWC2Q6AWC2 1192 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 GALNT17Q6IS24 598 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 CCDC102AQ96A19 550 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 PHF20Q9BVI0 1012 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 ZMYND12Q9H0C1 365 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 ZCCHC17Q9NP64 241 aaKnown RBP11.99□□□□□ -0.49
THBS3-206ENST00000469769 HOXC10Q9NYD6 342 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
THBS3-206ENST00000469769 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 ZNF536O15090 1300 aa11.99□□□□□ -0.49
THBS3-206ENST00000469769 COL11A1P12107 1806 aaPredicted RBP11.98□□□□□ -0.49
THBS3-206ENST00000469769 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
THBS3-206ENST00000469769 RASSF10A6NK89 507 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
THBS3-206ENST00000469769 M0R2N6 131 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 VWA5AO00534 786 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 FLOT1O75955 427 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 MMP1P03956 469 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
THBS3-206ENST00000469769 XBP1P17861 261 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 ZNF157P51786 506 aaPredicted RBP11.98□□□□□ -0.49
THBS3-206ENST00000469769 INHBEP58166 350 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 GHRHRQ02643 423 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 PABPC4Q13310 644 aaKnown RBP eCLIP11.98□□□□□ -0.49
THBS3-206ENST00000469769 KRT40Q6A162 431 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 CLEC17AQ6ZS10 378 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 ANKRD23Q86SG2 305 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 MAF1Q9H063 256 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 GJB4Q9NTQ9 266 aa11.98□□□□□ -0.49
THBS3-206ENST00000469769 MANSC4A6NHS7 340 aaPredicted RBP11.97□□□□□ -0.49
THBS3-206ENST00000469769 ICAM1P05362 532 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 U2AF2P26368 475 aaKnown RBP eCLIP11.97□□□□□ -0.49
THBS3-206ENST00000469769 HOMER1Q86YM7 354 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 MB21D1Q8N884 522 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 TNFRSF25Q93038 417 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 KIFC2Q96AC6 838 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 PTPN18Q99952 460 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
THBS3-206ENST00000469769 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
THBS3-206ENST00000469769 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
THBS3-206ENST00000469769 ZNF214Q9UL59 606 aaPredicted RBP11.97□□□□□ -0.49
THBS3-206ENST00000469769 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 BTBD19C9JJ37 291 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 OPLAHO14841 1288 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 CALML3P27482 149 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 TM4SF4P48230 202 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
THBS3-206ENST00000469769 RESTQ13127 1097 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 CCL15Q16663 113 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 OTUD7BQ6GQQ9 843 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
THBS3-206ENST00000469769 FBXO11Q86XK2 927 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
THBS3-206ENST00000469769 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
THBS3-206ENST00000469769 ATG4CQ96DT6 458 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.49
THBS3-206ENST00000469769 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
THBS3-206ENST00000469769 H3BQV1 296 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 PIK3CDO00329 1044 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 ZBED4O75132 1171 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 F13A1P00488 732 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 OSBPP22059 807 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 GNA11P29992 359 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
THBS3-206ENST00000469769 HERVK_113P62684 666 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 KIF23Q02241 960 aaPredicted RBP11.95□□□□□ -0.5
THBS3-206ENST00000469769 TRIM29Q14134 588 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 TMEM132BQ14DG7 1078 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 SAMD3Q8N6K7 520 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
THBS3-206ENST00000469769 COA7Q96BR5 231 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 P2RX7Q99572 595 aaKnown RBP11.95□□□□□ -0.5
THBS3-206ENST00000469769 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 KCNJ14Q9UNX9 436 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 PCDHA1Q9Y5I3 950 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 TCHHQ07283 1943 aa11.95□□□□□ -0.5
THBS3-206ENST00000469769 ABCB11O95342 1321 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 BTBD18B2RXH4 712 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 CNMDO75829 334 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 NAPAP54920 295 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 SNAP25P60880 206 aa11.94□□□□□ -0.5
THBS3-206ENST00000469769 GUCY1B3Q02153 619 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms