RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 CCDC148Q8NFR7 591 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 IVLP07476 585 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 TRAPPC10P48553 1259 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 LUC7L2Q9Y383 392 aaKnown RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 MYH10P35580 1976 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 TARSL2A2RTX5 802 aaKnown RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 USP17L21D6R901 530 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 GIMAP8Q8ND71 665 aaPredicted RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 JAKMIP2Q96AA8 810 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 GNL3LQ9NVN8 582 aaKnown RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 NTSR2O95665 410 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 CYP27A1Q02318 531 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 ARL6IP4Q66PJ3 421 aaKnown RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 CREG2Q8IUH2 290 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 SMCR8Q8TEV9 937 aaPredicted RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 EHD4Q9H223 541 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 CYP2D6P10635 497 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 LONP1P36776 959 aaKnown RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 CORO7P57737 925 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 NHEJ1Q9H9Q4 299 aaPredicted RBP11.54□□□□□ -0.56
SMC4-210ENST00000469762 FLT1P17948 1338 aa11.54□□□□□ -0.56
SMC4-210ENST00000469762 NLRP5P59047 1200 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 C2orf54Q08AI8 447 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 KCNB1Q14721 858 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 AENQ8WTP8 325 aaKnown RBP11.53□□□□□ -0.56
SMC4-210ENST00000469762 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.562e-13■□□□□ 9.3
SMC4-210ENST00000469762 PLIN2Q99541 437 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 THAP9Q9H5L6 903 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
SMC4-210ENST00000469762 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 EPHB6O15197 1021 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 CALM1P0DP23 149 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 CALM2P0DP24 149 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 CALM3P0DP25 149 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 STAT6P42226 847 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 MAGEA9P43362 315 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 STAG2Q8N3U4 1231 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
SMC4-210ENST00000469762 RMND1Q9NWS8 449 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 DMGDHQ9UI17 866 aaKnown RBP11.53□□□□□ -0.56
SMC4-210ENST00000469762 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
SMC4-210ENST00000469762 WNK3Q9BYP7 1800 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 CAMTA2O94983 1202 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 KLRK1P26718 216 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 PDE4CQ08493 712 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 ANKRD40Q6AI12 368 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 IQCA1Q86XH1 822 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 AFAP1L1Q8TED9 768 aa11.52□□□□□ -0.56
SMC4-210ENST00000469762 MKRN1Q9UHC7 482 aaKnown RBP11.52□□□□□ -0.56
SMC4-210ENST00000469762 ORC4O43929 436 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 STIM1Q13586 685 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 TUBGCP2Q9BSJ2 902 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 BRMS1Q9HCU9 246 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 PPFIA4O75335 1185 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.57
SMC4-210ENST00000469762 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 DOT1LQ8TEK3 1739 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 GRIN2DO15399 1336 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 CYTH3O43739 400 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 STK4Q13043 487 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 ZNF572Q7Z3I7 529 aaPredicted RBP11.52□□□□□ -0.57
SMC4-210ENST00000469762 ZSCAN29Q8IWY8 852 aaPredicted RBP11.52□□□□□ -0.57
SMC4-210ENST00000469762 KAT14Q9H8E8 782 aa11.52□□□□□ -0.57
SMC4-210ENST00000469762 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
SMC4-210ENST00000469762 TNNT3P45378 269 aaPredicted RBP11.51□□□□□ -0.57
SMC4-210ENST00000469762 DNM2P50570 870 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 EVA1CP58658 441 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
SMC4-210ENST00000469762 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
SMC4-210ENST00000469762 SMARCAL1Q9NZC9 954 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 ARHGAP20Q9P2F6 1191 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 PCDHA6Q9UN73 950 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 PCDHA8Q9Y5H6 950 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 HPS3Q969F9 1004 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 NSUN4Q96CB9 384 aaKnown RBP11.51□□□□□ -0.57
SMC4-210ENST00000469762 LRRC1Q9BTT6 524 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 ANO9A1A5B4 782 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 FCER1AP12319 257 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
SMC4-210ENST00000469762 CCSER1Q9C0I3 900 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
SMC4-210ENST00000469762 MACROD2A1Z1Q3 448 aa11.5□□□□□ -0.57
SMC4-210ENST00000469762 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms