RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.9■■□□□ 1.1
TTC28-205ENST00000469670 ARMCX2Q7L311 632 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 ANKRD35Q8N283 1001 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 FAM122AQ96E09 287 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 BCL11AQ9H165 835 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 BOLA2Q9H3K6 86 aa21.9■■□□□ 1.1
TTC28-205ENST00000469670 CTDP1Q9Y5B0 961 aaPredicted RBP21.9■■□□□ 1.1
TTC28-205ENST00000469670 CTAGE5O15320 804 aa21.89■■□□□ 1.09
TTC28-205ENST00000469670 NDUFB10O96000 172 aa21.89■■□□□ 1.09
TTC28-205ENST00000469670 TSPYL2Q9H2G4 693 aaPredicted RBP21.89■■□□□ 1.09
TTC28-205ENST00000469670 RAVER2Q9HCJ3 691 aaKnown RBP21.89■■□□□ 1.09
TTC28-205ENST00000469670 NYAP2Q9P242 653 aa21.89■■□□□ 1.09
TTC28-205ENST00000469670 NKX3-2P78367 333 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 BEX3Q00994 111 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 UBE3CQ15386 1083 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 OTOP2Q7RTS6 562 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 HIPK3Q9H422 1215 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 FBXO40Q9UH90 709 aa21.88■■□□□ 1.09
TTC28-205ENST00000469670 BAZ2AQ9UIF9 1905 aaKnown RBP21.88■■□□□ 1.09
TTC28-205ENST00000469670 UMODL1Q5DID0 1318 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 SLC43A3Q8NBI5 491 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 CHST13Q8NET6 341 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 KIFC2Q96AC6 838 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 NECAB3Q96P71 396 aaPredicted RBP21.87■■□□□ 1.09
TTC28-205ENST00000469670 KATNBL1Q9H079 304 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 SLC38A10Q9HBR0 1119 aa21.87■■□□□ 1.09
TTC28-205ENST00000469670 ARPP21Q9UBL0 812 aaPredicted RBP21.87■■□□□ 1.09
TTC28-205ENST00000469670 CCER2I3L3R5 266 aa21.86■■□□□ 1.09
TTC28-205ENST00000469670 ATP5JP18859 108 aa21.86■■□□□ 1.09
TTC28-205ENST00000469670 RASA1P20936 1047 aa21.86■■□□□ 1.09
TTC28-205ENST00000469670 CXCL17Q6UXB2 119 aa21.86■■□□□ 1.09
TTC28-205ENST00000469670 BDP1A6H8Y1 2624 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.85■■□□□ 1.09
TTC28-205ENST00000469670 RABGGTBP53611 331 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 CCL23P55773 120 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 TNFAIP2Q03169 654 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 PPP2R2DQ66LE6 453 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 NOL8Q76FK4 1167 aaKnown RBP21.85■■□□□ 1.09
TTC28-205ENST00000469670 STK11IPQ8N1F8 1099 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 MICALL1Q8N3F8 863 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 HAUS7Q99871 368 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 PUS7LQ9H0K6 701 aaKnown RBP21.85■■□□□ 1.09
TTC28-205ENST00000469670 MKNK2Q9HBH9 465 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
TTC28-205ENST00000469670 ASTN1O14525 1302 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 CABYRO75952 493 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 BMP1P13497 986 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 OAZ1P54368 228 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 ITGA7Q13683 1181 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 C1QTNF1Q9BXJ1 281 aa21.84■■□□□ 1.09
TTC28-205ENST00000469670 CNTN2Q02246 1040 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 TFF2Q03403 129 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 SBK1Q52WX2 424 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 PANK1Q8TE04 598 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 NOC4LQ9BVI4 516 aaKnown RBP21.83■■□□□ 1.09
TTC28-205ENST00000469670 HOMER2Q9NSB8 354 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 FEM1BQ9UK73 627 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 GNEQ9Y223 722 aaKnown RBP21.83■■□□□ 1.09
TTC28-205ENST00000469670 SLC4A7Q9Y6M7 1214 aa21.83■■□□□ 1.09
TTC28-205ENST00000469670 GRIN2DO15399 1336 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 MYOGP15173 224 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 FSCN1Q16658 493 aaKnown RBP21.82■■□□□ 1.08
TTC28-205ENST00000469670 AAK1Q2M2I8 961 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 ZSCAN25Q6NSZ9 544 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 TLK2Q86UE8 772 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 RPUSD2Q8IZ73 545 aaKnown RBP21.82■■□□□ 1.08
TTC28-205ENST00000469670 SEZ6LQ9BYH1 1024 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 TRPV6Q9H1D0 765 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 WNT8AQ9H1J5 351 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 PCDHA11Q9Y5I1 949 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 NCOR1O75376 2440 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 MYO9BQ13459 2157 aa21.82■■□□□ 1.08
TTC28-205ENST00000469670 GREB1LQ9C091 1923 aaPredicted RBP21.81■■□□□ 1.08
TTC28-205ENST00000469670 IGKV6D-41A0A0C4DH26 115 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 RAB11FIP3O75154 756 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 HMMRO75330 724 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
TTC28-205ENST00000469670 FAM133AQ8N9E0 248 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 AP5M1Q9H0R1 490 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 CHD7Q9P2D1 2997 aa21.81■■□□□ 1.08
TTC28-205ENST00000469670 ZBBXA8MT70 800 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 MINDY4BA8MYZ0 360 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 ZEB2O60315 1214 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 B4GALT4O60513 344 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 SKIV2LQ15477 1246 aaKnown RBP21.8■■□□□ 1.08
TTC28-205ENST00000469670 MKL1Q969V6 931 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 STRBPQ96SI9 672 aaKnown RBP21.8■■□□□ 1.08
TTC28-205ENST00000469670 ACAD9Q9H845 621 aa21.8■■□□□ 1.08
TTC28-205ENST00000469670 SOWAHBA6NEL2 793 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 ASB14A6NK59 587 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 GSG1L2A8MUP6 293 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 DYNC1LI2O43237 492 aaPredicted RBP21.79■■□□□ 1.08
TTC28-205ENST00000469670 ATP2A2P16615 1042 aaKnown RBP21.79■■□□□ 1.08
TTC28-205ENST00000469670 PTGS1P23219 599 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 KCNQ1P51787 676 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 SIRT2Q8IXJ6 389 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 VWCEQ96DN2 955 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 CEP95Q96GE4 821 aa21.79■■□□□ 1.08
TTC28-205ENST00000469670 SCLYQ96I15 445 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms